Gene Gmet_3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3340 
Symbol 
ID3740655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3754885 
End bp3755640 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content54% 
IMG OID637780630 
Producthypothetical protein 
Protein accessionYP_386278 
Protein GI78224531 
COG category[S] Function unknown 
COG ID[COG1852] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACA ATACTCCTAA AAAACGTCTT TTCATTGTGC TCATGGGGGT CACTTGTCTC 
CTGATTGTCG GCGCAATCTA CCTTCTCTGG TGGATTCCCA CGACCGGCTT GGCGAACATC
CACCCAAGCC TCCCTCGCAT CGCCGGAATA GTTTTTGGTG GCCTGTCCCT ACTAGCCCTC
CTTGGCACCC TTGTGCTCGT GCTGACCTCG GCGCTCGGCA AGGATATCCT TTTCACCCGT
TTTCTGCGCG GTGTTGTCAT CAAGTTTCTT CTTCCGGCCA TTGAACTGAT CGGTCGCACG
TTCGGCATCT CCATTGACAC CATCCGCCAG TCGTTCATTG CCATGAATAA CAGTCTGGTT
CTCTCCCAGC GTCGCCGGGT AAAACCCGAC CGAGTCTTGA TACTCCTGCC TCACTGTCTC
CAGCTTTTCG AATGCGAGAT CAAGGTGACC GGCAACATCA ACAAATGCGT CCGGTGCGGC
CGCTGCGATA TCATGGGACT GGCAGAACTG GCCGAAAAAT ACTCAATAGA TATCTCCGTG
GCCACAGGGG GAACTCTGGC ACGGAAGGTC ATCATAGAGA AACGTCCCAA ACTCGTTCTG
GCAGTTGCCT GCGAGCGTGA CCTGACTTCC GGTATCAAAG ACTGCTACCC CCTGCCGGTC
ATCGGAGTTC TGAACGACCG CCCCTTCGGA CCTTGCTTCA ACACCAAGGT TGACATAGAG
AAGATCAATG AAGCCCTACA GGCAGTAATT GGCTAG
 
Protein sequence
MPDNTPKKRL FIVLMGVTCL LIVGAIYLLW WIPTTGLANI HPSLPRIAGI VFGGLSLLAL 
LGTLVLVLTS ALGKDILFTR FLRGVVIKFL LPAIELIGRT FGISIDTIRQ SFIAMNNSLV
LSQRRRVKPD RVLILLPHCL QLFECEIKVT GNINKCVRCG RCDIMGLAEL AEKYSIDISV
ATGGTLARKV IIEKRPKLVL AVACERDLTS GIKDCYPLPV IGVLNDRPFG PCFNTKVDIE
KINEALQAVI G