Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3330 |
Symbol | |
ID | 3740723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3743786 |
End bp | 3744454 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637780620 |
Product | nickel-dependent hydrogenase b-type cytochrome subunit |
Protein accession | YP_386268 |
Protein GI | 78224521 |
COG category | [C] Energy production and conversion |
COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 66 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGGA ACCGGAGCTG TCTTTACGAA AAGTACGTCT GGGAGGTCCC GGTGCGGCTG ACCCACTGGG TCAACGTGAT CGCCATCATC GTCCTCTCGG TCACCGGCTT CTACATCGGC TCCCCCAGGA CCCTGGGGCT CGTTCCCGCC GACTTTGTCA TGGGTTGGGT GCGGGTGGTG CATCTTACGG CAGGGTATGC CTTTGCCGTG AGTATCGTGA GCCGCATCTG GTGGGCCTTC GCGGGGAACC GCTACGCCGG GTGGCGGGAG TTTGTCCCGT TCATCTATCC CGAAGGGCGG CGCGACATGG GGCGGATGTT CCTCTACTAC GTCTTCCTCT CCCGGAAGGT TCCCCACCCC ACCGGCCACA ACGCCCTGGC CGGAGCCACG TACCTTCTCG TCTTTGTCCT CTATCTGGTG ATGGCCGGCA CCGGCTTCGC CCTCGATGCC GAGCACGCGC CAGGCGGTTT GGCGCATGTT CTCCTCACGC CGCTCTACGC TCTCTTCAGC AACCAGGGGA TGCGGCTCAC CCACCACATG GGCATGTGGC TTCTCATCGC CTTTGCCATC CATCACATCT ACAGCGCTTG GCTCATGGAC GTGAAGGAAC GGGGCGGGGT CATGTCGAGC ATCTTCGGCG GCTACAAGCC GGTGAAGCGG GGGGAGTAG
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Protein sequence | MARNRSCLYE KYVWEVPVRL THWVNVIAII VLSVTGFYIG SPRTLGLVPA DFVMGWVRVV HLTAGYAFAV SIVSRIWWAF AGNRYAGWRE FVPFIYPEGR RDMGRMFLYY VFLSRKVPHP TGHNALAGAT YLLVFVLYLV MAGTGFALDA EHAPGGLAHV LLTPLYALFS NQGMRLTHHM GMWLLIAFAI HHIYSAWLMD VKERGGVMSS IFGGYKPVKR GE
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