Gene Gmet_3330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3330 
Symbol 
ID3740723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3743786 
End bp3744454 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content63% 
IMG OID637780620 
Productnickel-dependent hydrogenase b-type cytochrome subunit 
Protein accessionYP_386268 
Protein GI78224521 
COG category[C] Energy production and conversion 
COG ID[COG1969] Ni,Fe-hydrogenase I cytochrome b subunit 
TIGRFAM ID[TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGGA ACCGGAGCTG TCTTTACGAA AAGTACGTCT GGGAGGTCCC GGTGCGGCTG 
ACCCACTGGG TCAACGTGAT CGCCATCATC GTCCTCTCGG TCACCGGCTT CTACATCGGC
TCCCCCAGGA CCCTGGGGCT CGTTCCCGCC GACTTTGTCA TGGGTTGGGT GCGGGTGGTG
CATCTTACGG CAGGGTATGC CTTTGCCGTG AGTATCGTGA GCCGCATCTG GTGGGCCTTC
GCGGGGAACC GCTACGCCGG GTGGCGGGAG TTTGTCCCGT TCATCTATCC CGAAGGGCGG
CGCGACATGG GGCGGATGTT CCTCTACTAC GTCTTCCTCT CCCGGAAGGT TCCCCACCCC
ACCGGCCACA ACGCCCTGGC CGGAGCCACG TACCTTCTCG TCTTTGTCCT CTATCTGGTG
ATGGCCGGCA CCGGCTTCGC CCTCGATGCC GAGCACGCGC CAGGCGGTTT GGCGCATGTT
CTCCTCACGC CGCTCTACGC TCTCTTCAGC AACCAGGGGA TGCGGCTCAC CCACCACATG
GGCATGTGGC TTCTCATCGC CTTTGCCATC CATCACATCT ACAGCGCTTG GCTCATGGAC
GTGAAGGAAC GGGGCGGGGT CATGTCGAGC ATCTTCGGCG GCTACAAGCC GGTGAAGCGG
GGGGAGTAG
 
Protein sequence
MARNRSCLYE KYVWEVPVRL THWVNVIAII VLSVTGFYIG SPRTLGLVPA DFVMGWVRVV 
HLTAGYAFAV SIVSRIWWAF AGNRYAGWRE FVPFIYPEGR RDMGRMFLYY VFLSRKVPHP
TGHNALAGAT YLLVFVLYLV MAGTGFALDA EHAPGGLAHV LLTPLYALFS NQGMRLTHHM
GMWLLIAFAI HHIYSAWLMD VKERGGVMSS IFGGYKPVKR GE