Gene Gmet_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3293 
Symbol 
ID3741014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3706595 
End bp3707524 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content66% 
IMG OID637780583 
Producthydroxymethylglutaryl-CoA lyase 
Protein accessionYP_386231 
Protein GI78224484 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATGC CGACGCGGGT GAAGATGGTG GAGGTGGGGC CCCGGGACGG TCTCCAGAAC 
GAGAAGGCGA TCATCCCGGC CGAGGTAAAG ATCGCCCTTA TCGATAAGCT GTCGGAGGCG
GGGCTTCCGG CGATCGAGGT CACGAGCTTC GTCTCTCCCA CCTGGGTCCC CCAGATGGCC
GACAACGCCC AGGTCATGAC CGGAATCGCC CGCCGGGAGG GTGTCGCCTA TCCGGTTCTC
GTCCCTAACC GAAAGGGGCT GGAAGCGGCC ATTGCCGCCG GCGCGGCCGA AATCGCCATA
TTCGCCGCCG CCTCGGAGTC CTTCTCCCGA AAGAACATCA ACTGCTCCAT TGCCGAGAGT
CTGGAACGCT TCGCCGAGGT CATCACCGTG GCCAGGGTCC AGGGGTTGCG GGTGCGGGGG
TATGTCTCCT GCGTCCTCGG CTGCCCCTAC GAGGGTGAGG TGAGCTTCGA CGTGGTGGCA
GGGGTGGCAG GGCAGCTCCT GCAGCTCGGC TGCTACGAGA TATCTCTTGG CGACACCATC
GGCGTGGGCA CCCCCGGCCG GGCGCAGACC ATGGTGGATG TGGTGTCGAG ACTGGTGCCG
CGGGAGAAAC TGGCAGTCCA TTTCCACGAT ACCTACGGCC AGGCCCTGGC CAACATCCTG
GCAGTCCTCG AACGGGGCAT CGCCACCGTC GACAGCTCCG TGGCCGGCCT CGGCGGCTGT
CCTTACGCCG CCGGCGCCTC GGGCAACGTT GCCAGCGAGG ATCTTCTTTA CATGCTGAAC
GGCCTCGGCA TCGAGACCGG GGTCGACCTG GAACACCTCA TGGCCGCCGG AAACTACATC
TCCGGCCACT TGGGCCGCCC GTCGGGCTCC CGTGTGGCTC GGGCCATGGG GTGCTCTCCA
CACCAGATAA CGACGACGGC AAACGCCTGA
 
Protein sequence
MPMPTRVKMV EVGPRDGLQN EKAIIPAEVK IALIDKLSEA GLPAIEVTSF VSPTWVPQMA 
DNAQVMTGIA RREGVAYPVL VPNRKGLEAA IAAGAAEIAI FAAASESFSR KNINCSIAES
LERFAEVITV ARVQGLRVRG YVSCVLGCPY EGEVSFDVVA GVAGQLLQLG CYEISLGDTI
GVGTPGRAQT MVDVVSRLVP REKLAVHFHD TYGQALANIL AVLERGIATV DSSVAGLGGC
PYAAGASGNV ASEDLLYMLN GLGIETGVDL EHLMAAGNYI SGHLGRPSGS RVARAMGCSP
HQITTTANA