| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3288 |
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| Symbol | |
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| ID | 3741009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3698350 |
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| End bp | 3700317 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637780578 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_386226 |
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| Protein GI | 78224479 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAT TGGCTCCATT TTGTATTGCA GCACTTCTCA TGGGGGGCGC AGCCGTCGCA
GCCGAACCAG CCAAGCAAGC GACACCCTCC CAGACCTCCG CCGTTTCCGC GGCGGCCCCG
GCGCCAGCCC CTATGGCATC CGCGGCGGCC GCGACGGCCA AGAGCACTGC CGCCCCCGCA
GCCGGCGCGC CCGCCAAGAT CAAGACCAAC AAGGCCATCA CCCTCAGCAT GTTTGCCCTC
ATCGTCCTCG CCACCCTGGG GGTCGTGGTC TGGGCAGCCA GGAAGACCCA GACCGCTGCC
GACTACTACA CAGCCGGCGG CGGCATCACC GGCCTGCAGA ACGGTTGGGC CATCACCGGC
GACGTGGTCT CGGCTGCCTC GTTCCTGGGC ATGTCGGGAC TCATCTCTCT CTACGGGATC
GACGGGTTTC TCTACTCCAC CGGACCGATC CTCGGCTTCG TGACCATTCT CCTCCTCATG
GCTGAACCGC TCCGCAACGC CGGTAAGTAC ACCATGGGTG ACATCCTCTG CTTCCGGGCC
TCCCCGAAGC CGGTCCGGGC CGCGGCGGCC ATCTCCACCG TGGCGGTTTC CACCTTTTAT
CTCCTGGCCC AGATGGTGGG CGCCGGCAAA CTGATGCAGC TCCTGTTGGA CATCCCCTAC
AAGGTGTCGG TCATCGGCGT CGGCACACTC CTCATTATCT ATGTGGTGTT CGGCGGCATG
AAGGCCACTA CCTGGGTACA GATCATTAAA GCGTCTCTCC TTCTGTCCGC TGCGGTGCTT
CTGTCGATAT TGGTGGCGGT CAAGGCGGGG ATGAACCCCC TGCGCCTCTT TGCAGACGTG
GTCAACAGCG GCGCTGTTCA GGATCATGTC AGGATCGCCG TGCTCAAGCA TCCGCTCCCC
GAGCCTGGAT TCGATTACGG CAGGCGCTTC CTCCAGCCAG GCCTCTTCCT GAAGAATCCC
CTCGACCAGA TATCGCTGGG CCTCGCTTGG GTTCTGGGAG CCGCCGGCCT CCCTCATATC
ATGATGCGCT TCTTCACGGT GCCCAACGCC AAAGAGGCGC GTAAGTCGAT CCGGGTCTCG
GTTTTCCTTA TGGGTGCCTT TTTCATCATG ACTACCTTCC TCGGCTTCGG CGCCGCCATC
CACATCACCC CCCAGAAGGT CGCAGCCATG GACAAAGGTG GCAACATGGC GACCCTCCTG
CTTGCCCAGT ACCTGGGCGG GGGTGAAGGC TCCATTGGCG GCGACCTATT CCTCGCCTTC
GTCTGTGCGG TGGCCTTCGC CACCATCCTG GCCGTCGTCT CGGGGCTGGT GCTTGCGGCC
TCCGCCGCCA TTGCCCACGA CATCTACGTA AACATCGTAA AAAACGGCAA GGCCGACCAG
AAGGAACAGG TCCTGACCGC CCGCATCACT TCGCTTGTGG TGGGCACGGC CGCCATCTGG
CTGGGAATCG CCGCCGAAAA GGAGAATATC GTCGCCCTGG TGGCCCTTGC CTTTGCCGTG
GCCGCATCGG GTAACTTCCC GGTCATCATC CTCTCGCTCT TCTGGCGCAA GTTCAACACA
GCGGGGATCG TCTCGGGCAT TGTGGTCGGC ACCATTGCCG CAATTGGCCT CGTGCTGGTC
TCTCCCAACA TGACCTACCC GAAAAAAATC GCAGCCGATG CCAAGAATGT GATTGATACC
CTGGAGAAAA AGCAGGCGAC CGGCGAGATC CTGGCGGAGA AGGATCTGAA CGCCCTGAAC
AAGGCACGAA CCGACTACAC CAAGAACAAG GACGGCAAGT CGATCATGGG GCTGGACAAT
CCGCTCTTCC CGCTGAAGAA CCCCGGCATC GTCTCTGTCC CCCTCGGCTT CCTGGCCGCC
ATCATCGGCT GCCTGGCCTT CAGGGATCGC CGTGCCGAAG AGATGTTCGA CGAAATCTAT
GTACGTCAAA ATACCGGAAT TGGTATTGCC GAGGCAATAG ATCACTAA
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| Protein sequence | MKRLAPFCIA ALLMGGAAVA AEPAKQATPS QTSAVSAAAP APAPMASAAA ATAKSTAAPA
AGAPAKIKTN KAITLSMFAL IVLATLGVVV WAARKTQTAA DYYTAGGGIT GLQNGWAITG
DVVSAASFLG MSGLISLYGI DGFLYSTGPI LGFVTILLLM AEPLRNAGKY TMGDILCFRA
SPKPVRAAAA ISTVAVSTFY LLAQMVGAGK LMQLLLDIPY KVSVIGVGTL LIIYVVFGGM
KATTWVQIIK ASLLLSAAVL LSILVAVKAG MNPLRLFADV VNSGAVQDHV RIAVLKHPLP
EPGFDYGRRF LQPGLFLKNP LDQISLGLAW VLGAAGLPHI MMRFFTVPNA KEARKSIRVS
VFLMGAFFIM TTFLGFGAAI HITPQKVAAM DKGGNMATLL LAQYLGGGEG SIGGDLFLAF
VCAVAFATIL AVVSGLVLAA SAAIAHDIYV NIVKNGKADQ KEQVLTARIT SLVVGTAAIW
LGIAAEKENI VALVALAFAV AASGNFPVII LSLFWRKFNT AGIVSGIVVG TIAAIGLVLV
SPNMTYPKKI AADAKNVIDT LEKKQATGEI LAEKDLNALN KARTDYTKNK DGKSIMGLDN
PLFPLKNPGI VSVPLGFLAA IIGCLAFRDR RAEEMFDEIY VRQNTGIGIA EAIDH
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