Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3239 |
Symbol | hppA |
ID | 3740955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3644496 |
End bp | 3646550 |
Gene Length | 2055 bp |
Protein Length | 684 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637780526 |
Product | membrane-bound proton-translocating pyrophosphatase |
Protein accession | YP_386177 |
Protein GI | 78224430 |
COG category | [C] Energy production and conversion |
COG ID | [COG3808] Inorganic pyrophosphatase |
TIGRFAM ID | [TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000998265 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0229297 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGT ATGCAGTTTA TTTCGCCCTG GCCTGTGCCG TGGCGGCCGT CGCCTACGGC CTCGTTTCGG CCCAGTGGAT TCTGGGGCTC CCCCAGGGCA ACGACCGGAT GCGCCAGATT GCGGCAGCCA TCCAGGAGGG TGCCGGCGCC TACATGAAGC GCCAGTACAC CATCATCGCC GTCGTCGGGG TGATCATGTT CATCGCCCTG TTCGCTACCC TGGGGATGAA AACCGCCATC GGCTTCGCCA TCGGCGCCCT CTTCTCGGGA CTGACCGGCT TCATCGGCAT GTTCGTTTCG GTCCGCGCCA ACATCCGCAC CACGGAAGCG GCCAAATCCG GCATCCACAA GGCCCTCAAC GTGGCCTTCA AGGGGGGCGC CATTACCGGC ATGCTGGTGG TGGGTCTGGG GCTCCTGGGT GTTGCCGGTT ACTACTTCAT CCTCCAGCAG GTCATGCCGG GCGCCCCGGT GAAAGAGGTG GTCAGCCAGC TTGTGGGCCT CGGCTTCGGC GGCTCGCTCA TCTCCATCTT CGCCCGTCTC GGCGGCGGCA TCTTCACCAA GGGTGCCGAC GTGGGCGCCG ACCTGGTGGG TAAGGTGGAG GCCGGCATCC CCGAGGACGA CCCCCGCAAC CCGGCGGTCA TCGCCGACAA CGTGGGGGAC AACGTGGGTG ACTGCGCCGG CATGGCCGCC GACCTGTTCG AGACCTACGC CGTGACCCTC ATCGCCGCCA TGCTCCTCGG CGCCATCGCC TTCACCGGCA ATGTCGCCGC CGTCAACTAT CCGCTGATCC TCGGCGGCAT CTCCATCGTC GCCTCCATCA TCGGCACCTT CTTCGTGAAG CTGGGCGGCA ACCAGAAGAT CATGCCCGCA CTCTACAAGG GGCTCATCGC TTCCGGCGTC CTGGCCTGCA TCGCCTTCTA TGTGGTGACC GCCCAGATGT TCCCCCAGGG GCTGACCACT GCCGCCGGGG TGACCTATTC GGCCACCAAC CTCTTCATCT CCGCCATCGT GGGCCTCGTG GTCACCGGTG CCATCTTCTG GATCACCGAA TACTACACCG CCACCGAGTA CGGGCCGGTT AAGCACATCG CCCAGGCCTC CACCACCGGC CACGCCACCA ACATCATCGC CGGCCTCGGC GTCTCCATGA AGTCCACCGC CATGCCGGTC ATCGTCATCG CCGCCGGCAT CATCGTCGCC TTCCAGTGCG CCGGAGTCTA CGGCATCGCC ATTGCCGCCG TCTCCATGCT GTCGCTGACC GGCATCGTCG TCGCCATGGA CGCCTACGGC CCCATCACCG ACAACGCCGG TGGCATCGCC GAGATGGCCG AGCTGGACGA CTCGGTCCGC GCCGTCACCG ACCCCCTGGA CGCCGTGGGG AACACCACCA AGGCGGTCAC CAAGGGGTAC GCCATTGGCT CCGCCGGCCT TGCCGCGGTC ATCCTCTTCA CCTCCTACGT AGATGAGCTG AAGCTGGCCG GCAAGATTAT TGACTTCAAC CTGGCCGATC CCTACATCAT CGTCGGTCTG TTCCTCGGCG GGATGCTCCC CTACTACTTC GCCGCCCTCT GCATGGAGGC GGTTGGCAAG GCGGGCGGGT CGGTCGTTGA GGAAGTCCGT CGCCAGTTCC GTGAAATCAA GGGAATCATG GAAGGGACCG GCAAGCCGGA CTACGCCTCC TGCGTCGACA TCGTGACCAG GACGGCGCTT AAGGAGATGG TCATTCCCGG CATCATCCCC ATCGCCGCTC CGATCATCAT CGGTTTCACC CTCGGCCCCA AGGCCCTGGG CGGGGTCATC GTCGGCACCA TCGTCACCGG TATCTTCGTG GCCATCTCCA TGACCACCGG CGGCGGCGCC TGGGATAACG CCAAGAAGTA CATCGAGGAC GGCTACCACG GCGGCAAGGG TGGCGACGCC CACAAGGCCG CCGTCACTGG CGACACCGTC GGCGACCCCT ACAAGGATAC CGCCGGCCCG GCCGTCAACC CGATGATCAA GATCATCAAC ATCGTGTCGC TCCTCATCGT GCCGCTGCTC GCCAAGCTGG GGTAA
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Protein sequence | MEQYAVYFAL ACAVAAVAYG LVSAQWILGL PQGNDRMRQI AAAIQEGAGA YMKRQYTIIA VVGVIMFIAL FATLGMKTAI GFAIGALFSG LTGFIGMFVS VRANIRTTEA AKSGIHKALN VAFKGGAITG MLVVGLGLLG VAGYYFILQQ VMPGAPVKEV VSQLVGLGFG GSLISIFARL GGGIFTKGAD VGADLVGKVE AGIPEDDPRN PAVIADNVGD NVGDCAGMAA DLFETYAVTL IAAMLLGAIA FTGNVAAVNY PLILGGISIV ASIIGTFFVK LGGNQKIMPA LYKGLIASGV LACIAFYVVT AQMFPQGLTT AAGVTYSATN LFISAIVGLV VTGAIFWITE YYTATEYGPV KHIAQASTTG HATNIIAGLG VSMKSTAMPV IVIAAGIIVA FQCAGVYGIA IAAVSMLSLT GIVVAMDAYG PITDNAGGIA EMAELDDSVR AVTDPLDAVG NTTKAVTKGY AIGSAGLAAV ILFTSYVDEL KLAGKIIDFN LADPYIIVGL FLGGMLPYYF AALCMEAVGK AGGSVVEEVR RQFREIKGIM EGTGKPDYAS CVDIVTRTAL KEMVIPGIIP IAAPIIIGFT LGPKALGGVI VGTIVTGIFV AISMTTGGGA WDNAKKYIED GYHGGKGGDA HKAAVTGDTV GDPYKDTAGP AVNPMIKIIN IVSLLIVPLL AKLG
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