Gene Gmet_3239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3239 
SymbolhppA 
ID3740955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3644496 
End bp3646550 
Gene Length2055 bp 
Protein Length684 aa 
Translation table11 
GC content65% 
IMG OID637780526 
Productmembrane-bound proton-translocating pyrophosphatase 
Protein accessionYP_386177 
Protein GI78224430 
COG category[C] Energy production and conversion 
COG ID[COG3808] Inorganic pyrophosphatase 
TIGRFAM ID[TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000998265 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0229297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGT ATGCAGTTTA TTTCGCCCTG GCCTGTGCCG TGGCGGCCGT CGCCTACGGC 
CTCGTTTCGG CCCAGTGGAT TCTGGGGCTC CCCCAGGGCA ACGACCGGAT GCGCCAGATT
GCGGCAGCCA TCCAGGAGGG TGCCGGCGCC TACATGAAGC GCCAGTACAC CATCATCGCC
GTCGTCGGGG TGATCATGTT CATCGCCCTG TTCGCTACCC TGGGGATGAA AACCGCCATC
GGCTTCGCCA TCGGCGCCCT CTTCTCGGGA CTGACCGGCT TCATCGGCAT GTTCGTTTCG
GTCCGCGCCA ACATCCGCAC CACGGAAGCG GCCAAATCCG GCATCCACAA GGCCCTCAAC
GTGGCCTTCA AGGGGGGCGC CATTACCGGC ATGCTGGTGG TGGGTCTGGG GCTCCTGGGT
GTTGCCGGTT ACTACTTCAT CCTCCAGCAG GTCATGCCGG GCGCCCCGGT GAAAGAGGTG
GTCAGCCAGC TTGTGGGCCT CGGCTTCGGC GGCTCGCTCA TCTCCATCTT CGCCCGTCTC
GGCGGCGGCA TCTTCACCAA GGGTGCCGAC GTGGGCGCCG ACCTGGTGGG TAAGGTGGAG
GCCGGCATCC CCGAGGACGA CCCCCGCAAC CCGGCGGTCA TCGCCGACAA CGTGGGGGAC
AACGTGGGTG ACTGCGCCGG CATGGCCGCC GACCTGTTCG AGACCTACGC CGTGACCCTC
ATCGCCGCCA TGCTCCTCGG CGCCATCGCC TTCACCGGCA ATGTCGCCGC CGTCAACTAT
CCGCTGATCC TCGGCGGCAT CTCCATCGTC GCCTCCATCA TCGGCACCTT CTTCGTGAAG
CTGGGCGGCA ACCAGAAGAT CATGCCCGCA CTCTACAAGG GGCTCATCGC TTCCGGCGTC
CTGGCCTGCA TCGCCTTCTA TGTGGTGACC GCCCAGATGT TCCCCCAGGG GCTGACCACT
GCCGCCGGGG TGACCTATTC GGCCACCAAC CTCTTCATCT CCGCCATCGT GGGCCTCGTG
GTCACCGGTG CCATCTTCTG GATCACCGAA TACTACACCG CCACCGAGTA CGGGCCGGTT
AAGCACATCG CCCAGGCCTC CACCACCGGC CACGCCACCA ACATCATCGC CGGCCTCGGC
GTCTCCATGA AGTCCACCGC CATGCCGGTC ATCGTCATCG CCGCCGGCAT CATCGTCGCC
TTCCAGTGCG CCGGAGTCTA CGGCATCGCC ATTGCCGCCG TCTCCATGCT GTCGCTGACC
GGCATCGTCG TCGCCATGGA CGCCTACGGC CCCATCACCG ACAACGCCGG TGGCATCGCC
GAGATGGCCG AGCTGGACGA CTCGGTCCGC GCCGTCACCG ACCCCCTGGA CGCCGTGGGG
AACACCACCA AGGCGGTCAC CAAGGGGTAC GCCATTGGCT CCGCCGGCCT TGCCGCGGTC
ATCCTCTTCA CCTCCTACGT AGATGAGCTG AAGCTGGCCG GCAAGATTAT TGACTTCAAC
CTGGCCGATC CCTACATCAT CGTCGGTCTG TTCCTCGGCG GGATGCTCCC CTACTACTTC
GCCGCCCTCT GCATGGAGGC GGTTGGCAAG GCGGGCGGGT CGGTCGTTGA GGAAGTCCGT
CGCCAGTTCC GTGAAATCAA GGGAATCATG GAAGGGACCG GCAAGCCGGA CTACGCCTCC
TGCGTCGACA TCGTGACCAG GACGGCGCTT AAGGAGATGG TCATTCCCGG CATCATCCCC
ATCGCCGCTC CGATCATCAT CGGTTTCACC CTCGGCCCCA AGGCCCTGGG CGGGGTCATC
GTCGGCACCA TCGTCACCGG TATCTTCGTG GCCATCTCCA TGACCACCGG CGGCGGCGCC
TGGGATAACG CCAAGAAGTA CATCGAGGAC GGCTACCACG GCGGCAAGGG TGGCGACGCC
CACAAGGCCG CCGTCACTGG CGACACCGTC GGCGACCCCT ACAAGGATAC CGCCGGCCCG
GCCGTCAACC CGATGATCAA GATCATCAAC ATCGTGTCGC TCCTCATCGT GCCGCTGCTC
GCCAAGCTGG GGTAA
 
Protein sequence
MEQYAVYFAL ACAVAAVAYG LVSAQWILGL PQGNDRMRQI AAAIQEGAGA YMKRQYTIIA 
VVGVIMFIAL FATLGMKTAI GFAIGALFSG LTGFIGMFVS VRANIRTTEA AKSGIHKALN
VAFKGGAITG MLVVGLGLLG VAGYYFILQQ VMPGAPVKEV VSQLVGLGFG GSLISIFARL
GGGIFTKGAD VGADLVGKVE AGIPEDDPRN PAVIADNVGD NVGDCAGMAA DLFETYAVTL
IAAMLLGAIA FTGNVAAVNY PLILGGISIV ASIIGTFFVK LGGNQKIMPA LYKGLIASGV
LACIAFYVVT AQMFPQGLTT AAGVTYSATN LFISAIVGLV VTGAIFWITE YYTATEYGPV
KHIAQASTTG HATNIIAGLG VSMKSTAMPV IVIAAGIIVA FQCAGVYGIA IAAVSMLSLT
GIVVAMDAYG PITDNAGGIA EMAELDDSVR AVTDPLDAVG NTTKAVTKGY AIGSAGLAAV
ILFTSYVDEL KLAGKIIDFN LADPYIIVGL FLGGMLPYYF AALCMEAVGK AGGSVVEEVR
RQFREIKGIM EGTGKPDYAS CVDIVTRTAL KEMVIPGIIP IAAPIIIGFT LGPKALGGVI
VGTIVTGIFV AISMTTGGGA WDNAKKYIED GYHGGKGGDA HKAAVTGDTV GDPYKDTAGP
AVNPMIKIIN IVSLLIVPLL AKLG