| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3234 |
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| Symbol | hemC |
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| ID | 3740950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3639530 |
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| End bp | 3640486 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637780521 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_386172 |
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| Protein GI | 78224425 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00122468 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.150053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCGA AGCAGCTGAG AATAGGAACC CGGGCGAGCC AGCTTGCCCT CTGGCAGGCC
AACTGGGTGA AGGGTGAGCT GGAAAAGCGC TACCCCGGCA TGGCCGTGGA ACTCGTCAAG
ATCAAGACCA TGGGGGACAA GATCCTCGAC GTCCCCCTGG CCCAGGTGGG GGGCAAGGGG
CTCTTTGTCA AGGAGATTGA AGAGGCGATG CTCCGGGGCG AGATCGATAT CGCGGTCCAC
AGCATGAAGG ACGTCCCCAC CGAATTCCCC GAGGGGCTCG GCCTCTACTG CATCACCGAG
CGGGAGGACC CGCGCGATGC CGTCATCTCC CGGGGGGTGA AATTCGCCGA CCTTCCCCAG
GGGGCTCGTA TCGGCACCTC GGCCCTGCGC CGCCAGGCCC AGATCCTCAA GGTGCGCCCC
GACCTCCAGA TGGTGGTCAT CCGCGGCAAC GTGGAGACCC GCATCCGCAA GCTCACCGAC
GAGAACCTGG ATGCGGTCAT TCTGGCCGCT GCCGGCCTGA ACCGCCTCGG CTTCGCCGAC
CAGGTCTCCG AGTACCTGCC GGTGGAGCTG TCGCTCCCGG CCATCGGCCA GGGGGCCCTC
GGCATCGAGT GCCGCCTCGA TGACGAAACC ATCAAGGATA CCATCGCCTT CTTCAACCAC
CCCGACACCG CCCACGCGGT CCGGGCCGAG CGGGCGCTTC TGTGGCGCTG CGAAGGCGGC
TGCCAGGTCC CCATAGCCGC CCACGGCCAG GTTTCCGGCG ACACCCTCAC CCTCACCGGC
TTCGTCGCCT CGGTGGATGG CACCCGCTCG GTGAAGGACA CCATCTCCGG ACCGGTGACG
GAGTGCGAGA AGCTCGGCAT TGCCCTGGCG GAGAAGCTCC TGGCCGACGG CGCCCACGAG
ATCCTCGCTG AGGTCTACCA GCGGGAAGTG GCGCGGGAGA AGGAAATCCC GGTCTAG
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| Protein sequence | MAPKQLRIGT RASQLALWQA NWVKGELEKR YPGMAVELVK IKTMGDKILD VPLAQVGGKG
LFVKEIEEAM LRGEIDIAVH SMKDVPTEFP EGLGLYCITE REDPRDAVIS RGVKFADLPQ
GARIGTSALR RQAQILKVRP DLQMVVIRGN VETRIRKLTD ENLDAVILAA AGLNRLGFAD
QVSEYLPVEL SLPAIGQGAL GIECRLDDET IKDTIAFFNH PDTAHAVRAE RALLWRCEGG
CQVPIAAHGQ VSGDTLTLTG FVASVDGTRS VKDTISGPVT ECEKLGIALA EKLLADGAHE
ILAEVYQREV AREKEIPV
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