Gene Gmet_3230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3230 
Symbol 
ID3740946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3636182 
End bp3636511 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content60% 
IMG OID637780517 
Productthioredoxin 
Protein accessionYP_386168 
Protein GI78224421 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value9.30614e-09 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.223494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGTG AAAAGGTGCT GACGTTCAGT GATGATAACT TCGATACCGA TGTGCTCAAG 
GCTACCGTTC CGGTCCTTGT GGATTTCTGG GCCACCTGGT GCGCCCCCTG CAAGGCCATC
GCCCCGGTCA TCGACGCCAT TGCCGACGAG TACGACGGCA AGGTGAAGGT CGGCAAGGTA
AACGTGGACG ACAACCCCGG CACCCCCGGC AAGTATGGCG TACGCGGCAT CCCTACGGTC
ATCCTCTTCA AGGACGGCAA GGTTGTCGAC CAGGTCGTAG GGGCTGTTCC CAAGGCTCAG
CTTGAGGCCC TCATCAAGAA GGCGCTCTAG
 
Protein sequence
MASEKVLTFS DDNFDTDVLK ATVPVLVDFW ATWCAPCKAI APVIDAIADE YDGKVKVGKV 
NVDDNPGTPG KYGVRGIPTV ILFKDGKVVD QVVGAVPKAQ LEALIKKAL