Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3230 |
Symbol | |
ID | 3740946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3636182 |
End bp | 3636511 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637780517 |
Product | thioredoxin |
Protein accession | YP_386168 |
Protein GI | 78224421 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00000000930614 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.223494 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGTG AAAAGGTGCT GACGTTCAGT GATGATAACT TCGATACCGA TGTGCTCAAG GCTACCGTTC CGGTCCTTGT GGATTTCTGG GCCACCTGGT GCGCCCCCTG CAAGGCCATC GCCCCGGTCA TCGACGCCAT TGCCGACGAG TACGACGGCA AGGTGAAGGT CGGCAAGGTA AACGTGGACG ACAACCCCGG CACCCCCGGC AAGTATGGCG TACGCGGCAT CCCTACGGTC ATCCTCTTCA AGGACGGCAA GGTTGTCGAC CAGGTCGTAG GGGCTGTTCC CAAGGCTCAG CTTGAGGCCC TCATCAAGAA GGCGCTCTAG
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Protein sequence | MASEKVLTFS DDNFDTDVLK ATVPVLVDFW ATWCAPCKAI APVIDAIADE YDGKVKVGKV NVDDNPGTPG KYGVRGIPTV ILFKDGKVVD QVVGAVPKAQ LEALIKKAL
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