| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3216 |
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| Symbol | |
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| ID | 3740971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3615370 |
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| End bp | 3617301 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637780503 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_386154 |
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| Protein GI | 78224407 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000674385 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00000466075 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGATACACA GCAGAACGAT CTTGGTCCCG ACCCTCCTCT TTCAGCTTGC ACTCGCGCTC
CCCCTTGCTG CAGGGGCCGA CAGCCGTTGC GACGACGCAA AGCGCCTGGC AGCCACCATC
CCGGTGCAGG CCGATGGCGA TACGACGAGG AAAACCGAGG ATGTCGTCCT CGAATCCTGT
GCCGACGGGG CCGCGGGCTA TTTCGTCCGA GGCCTCCGCG CGGAGCGGGC GGGACGCCAT
GACGAGGCAA TCAAGGACTA CCGCGAGGCT CTCCGCCTTG AGCCGGCCTT TCCCCGGGCA
CAGGGAAACC TGGGCCTCGC CCTCCTGGCT AAAGGAAGTC ACGACGACGC CGTCGTGGAA
CTGACCCGGG CCATCTCCTC CGACCCCGAC CCAGGCTACC ACCATGGCCT TGCCATGATC
TTCGGCCAGC GCAAGATATA CTCCCTCGCC CTCTACCATT ACGCTGAAGC GGCAAAGGGG
CTCCCTGCCG ACCCGGTAAT CCCCACCGAG CTTGCCGCCC TCTACCGTGA GATGGGGAAG
GTTAGCGACG CCGAAAAGCA GTACCGCAAG GCCCTCAGCC TCTCCCCCTC CCACGAAGAG
GCACGAGTGG GCCTTGCGTC CCTCTACATG GCGGAAGGGC GGACCGACCG GGCAATCGAG
GAACTGAAAC AGGCCCAGAT CGCCAGCCCC GGGAACAAGG AGGTCAGCAG CCTCCTCGCC
GAGGCCTATG AGAAAAAGGG GGACCGTCAG GCAGCCGACT ACCAGTCACT CCTGGCGGGG
AAGCAGCGCG GTGTCCTCTC CGACGAGCGA CTCAGGAGGG GAGACGAACT CATGCAGGCC
AAGGAGTATG CAAAGGCCGC GGAAGAGTTC AAGGCGGCAC TCAGGGAAAA ACCCGACTGG
CCAGAGGCCC TGATGAGGCT CGCCGAAGCC CAGACGGCAG CGGGGTTCGA TGACGAGGCC
ATTACCTCCT ACAAGGAGTT GATCAGGCTC AAACTCGGCA CCGGCGATAC CCACTACAAC
CTCGGCGTCC TCTATGAGCG GAAGGGTCTC ATCGACGAGG CAGTGGTCGA GTACAAACAG
GCAATCCACA GTTCACCCGA CAACGGCGAC GCCCGCCGAC GCCTGGCAGA CATATATGCG
CTTCGCGGCA GCTACCCCCA GGCCATCGAA CAGTACCGCG AGCTTCTCAA GAAAGGGGAC
AACAACCCGG TCCTCCATCT GAAACTCGCC CGGGCACTGC TGGGGGCCAA GAACCCCAAG
GAAGCCATGG CCTCCTACCA GGACGCCCTC AAAATCGCTC CCGACAACCT GGAGGCCCGC
CGCGAACTGG CGGCCCTCTA CCGCAAGGGA AACCAGAACG AGGAGGCGGA GAAGCAATAC
AAGGAAATCC TCCGCATCAA GAAAGACGAC GCCGAAGCCC GCAACATCCT CACTGCGCTC
TATGTGAAGT CCAAGAAATA CGACGAATTA ATCACCCTTC TGAAGGACGG GGTGGAACTC
GCCCCCAATG ATCCGGCCAG CCATTACAAG CTTGGGCTCA TCTACGAATT CAAGAAGGAC
TACGATGCCG CCGAACAAGA GTACAAAAAG GCGGTGGAAC TGAAGGGGGA TCACGCCAAG
AGTCTCAATG CCCTGGGACG GATCTACCTG AAGACGGGAA AGATCTCCGA AGCAAAAGGA
GCTCTGGAAG CAGCCAAGAA AGCCGACCCG GGAATGGAAG AAACAGCCGT CCTTCTGAGC
AACATCAAAG AAGAACTTTC TCCCGAACCA CCCCGCTACA GCAAGAAAGG GCGCAAAGGA
AAAGCTTCGA AAGAGGCAAA AAAATCCCGG GCATCAAAGA AGAAATCATC GAAGAAGGGC
GCTAAGGCCA CTTCCAAGAA ATCATCCACT AAATCCGGAG GCAAGGCCAA AAAAGCCAAG
AAGAGCCACT AG
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| Protein sequence | MIHSRTILVP TLLFQLALAL PLAAGADSRC DDAKRLAATI PVQADGDTTR KTEDVVLESC
ADGAAGYFVR GLRAERAGRH DEAIKDYREA LRLEPAFPRA QGNLGLALLA KGSHDDAVVE
LTRAISSDPD PGYHHGLAMI FGQRKIYSLA LYHYAEAAKG LPADPVIPTE LAALYREMGK
VSDAEKQYRK ALSLSPSHEE ARVGLASLYM AEGRTDRAIE ELKQAQIASP GNKEVSSLLA
EAYEKKGDRQ AADYQSLLAG KQRGVLSDER LRRGDELMQA KEYAKAAEEF KAALREKPDW
PEALMRLAEA QTAAGFDDEA ITSYKELIRL KLGTGDTHYN LGVLYERKGL IDEAVVEYKQ
AIHSSPDNGD ARRRLADIYA LRGSYPQAIE QYRELLKKGD NNPVLHLKLA RALLGAKNPK
EAMASYQDAL KIAPDNLEAR RELAALYRKG NQNEEAEKQY KEILRIKKDD AEARNILTAL
YVKSKKYDEL ITLLKDGVEL APNDPASHYK LGLIYEFKKD YDAAEQEYKK AVELKGDHAK
SLNALGRIYL KTGKISEAKG ALEAAKKADP GMEETAVLLS NIKEELSPEP PRYSKKGRKG
KASKEAKKSR ASKKKSSKKG AKATSKKSST KSGGKAKKAK KSH
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