Gene Gmet_3196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3196 
SymbolrpmA 
ID3741106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3597292 
End bp3597549 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content63% 
IMG OID637780483 
Product50S ribosomal protein L27 
Protein accessionYP_386134 
Protein GI78224387 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0211] Ribosomal protein L27 
TIGRFAM ID[TIGR00062] ribosomal protein L27 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.40306e-15 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value7.87501e-24 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCACACA AGAAAGGCGT CGGTTCCACA CGGAACGGGC GCGATTCCGA ATCAAAACGA 
CTCGGCTGCA AGAAGTACGG CGGCGAGAAC GTCAAGGCGG GGAACATCAT CTACCGCCAG
CGCGGCACCC AGATCCACCC CGGCACCAAC GTGGGGTGCG GCAAGGACTA CACCCTCTTC
GCCCTCATCG ACGGCGTGGT GAAGTTCGAG CGACTGGGCC GCGACCGGAA GAAGGTCTCC
GTCTACCCGG CCAGCTAA
 
Protein sequence
MAHKKGVGST RNGRDSESKR LGCKKYGGEN VKAGNIIYRQ RGTQIHPGTN VGCGKDYTLF 
ALIDGVVKFE RLGRDRKKVS VYPAS