Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3187 |
Symbol | |
ID | 3741097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 3587525 |
End bp | 3589759 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637780474 |
Product | DNA polymerase B, exonuclease |
Protein accession | YP_386125 |
Protein GI | 78224378 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0000000163636 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCCGAGC CCCGCCTCAC CGAAAGCCCC CTCCTCTCCG GCGCCGATCC CACGGAAGGG ATCGTTGCCG CCGAACTGGC GGGACGGTTC ATCCGCCTCT TCATCCGCAC GCCTGGCGGC GTCATCTTCA GGGACACCCC CTTCCGCCCC TTCATCCTCC TGGAGGACCG GGCACTTTTG GGCGGCTTCC GGAGCGACGT CGAGACCCGC CCCCTGGCCG GCCCCGGCGC CTTCCGTTAC CTGGCCCTCT TCGCCGATTG GTCCGAATGC CTCGCCGCCC GGGATTTCCT GGCGAAGCGG ACCGGCCATA CCCCCTCCGC CCCCGACGCT CCCTACCTCT TTCTCTCGGA CCCGGTGCAC CAACACCTCC TCCTCGCCGG CACCACCTTC TTCAAAGGGC TGGAATTCAA TGCGCTGCGC CGCCTGGCCC TGGATATCGA GACCGCCTGC GCCGAGGGGT TCGAGTTCTC CAACCCGGCG CGGGAGGAGG ACCGCATCCT TTCCATCGCC GTCATGGAGG AAGGGGGCTA TGAGGAGTAC CTGTCGGCCC ATGCACTCTC CGAGCGGGAG ATGCTGGAAC GGCTCACCGC CATCATCCGG GAGCGGGATC CGGACGTAAT CGAAGGGCAC AACCTCTTCC GCTTTGACCT CGAATACATC AGGGCCCGGG CGGCCCGGCA CGGGGTCAGG CTCCGTTGGG GGCGCGACGG GAGCGAGCCC CGGGTCCACC CTTCCCGGTT CGCCGTGGCG GAGCGGACCA TCGACTATCC CCGCTGGAAC ATTTACGGCC GCTCGGTCAT GGACACCTAC TTCCTCCTTC AAATCTATGA CGTCTCCAGC CGGGAACTGG AGAGCCACGG CCTCAAGCAG GCGGCTATCC ACTTCGGCCT CGCCTCACCC GACCGGGTCT ACCTGGACCG TCAGGCCATG GACGAGGTCT TCCGCAGCGA CCCGGAGGCG CTCAGGCGCT ACAATCTGGA CGACGTGCGG GAGACCCTTG CCCTGTCGCG GCTCCTCTCC TACCCCTGGT TCCTTCAGGC CCGCATCTTT CCCTACTCCT ACCAGACCTG CGTCATCCGG GGGAACGCCA CGCGGATCAA CGCTCTCTTC CTGCGGGAAT ACCTGCGGCA GGGCGCTGCG GTCCCGAAAC CTGCCGGATC CGTGGGGACC TTCGAGGGTG GGTACGCCGC CGTCTTCGAG ACCGGCGTTC TCGGCCCCAT CGTCCACTGC GACGTGGCCT CCCTCTACCC CTCCATCATG CTTGCTTACG GCCTAGACCC CCGACGGGAG CACCTGGGGC TCTTCCTGCC GCTCCTGGCG CAGTTGCGGC AGTTTCGCCT CGCCGCCAAG GAGCGGGCAC GGGAGGCGGC GCTCCCCCAC GAGCGAGACT ACTTCAACGC CCTCCAGCAG ACCTTCAAGG TGCTCATCAA CTCCTTCTAC GGCTACCTGG GAACCACCAT CCACACCTTC TCCGACCCGG GGGTGGCCGC CGAGGTGACC CGCCGGGGGC GAGAGCTGAT CCAGGACATG ATCGAATGGC TTCGCCGGCA CGGGGCTCGT CCCGTGGAAG TGGACACCGA CGGCATCTAC TTCATCCCTC CGCAGGGGAT AGAAACCATC GGGCAGGAGG AGGCCCTTGT CCGGGAGCTC TCCGCAACCC TCCCGGAAGG GATTGCCGTG GAGATGGACG GCCGGTACCG CGCCATCTTC TCCTACAAGA TAAAGAACTA CGCCCTCCTG GACCACGACG GGAAGGTAAT TGTCAGGGGA AGCGCCCTCC GCTCCCGGGG GATAGAACGG TACCTGCGGG ACTTCATGGC AGCGGCGGTC CGGCTCCTGC TACAGGGCGA CGGGGCAAAA ATCCCGGCGT TCCACGAGGA CTGCATCCGG CGCCTGCGGA ACCACCTCAT CCCCATCGAG AGCCTCGCCC GCACCGAAAC CCTCGGTGAA GCGCCGCCCA CCTATCTCCA GAAGGTCCGC CAAGGGAAGC GGAACCCGTC GGCGGCATTC GAGATAGCCC TGCGCGCCGA GCGCCCCTTC CGGGCCGGCG ACCAGATCAG CTACTACGTA ACGGGACACG GAAAAGGGGT GACCGTCTAC GAAAACTGCA AGCCGGTCTC CCAGTACGAT CCAACCCGGC CCGATGAAAA TACGGAATTC TATCTCGACA AGCTCAACCA GCTCGTGAAA AGGCTTGCCG CCTACCTGCC GAAGGAGCCC ACCCTCTTTG ACTGA
|
Protein sequence | MAEPRLTESP LLSGADPTEG IVAAELAGRF IRLFIRTPGG VIFRDTPFRP FILLEDRALL GGFRSDVETR PLAGPGAFRY LALFADWSEC LAARDFLAKR TGHTPSAPDA PYLFLSDPVH QHLLLAGTTF FKGLEFNALR RLALDIETAC AEGFEFSNPA REEDRILSIA VMEEGGYEEY LSAHALSERE MLERLTAIIR ERDPDVIEGH NLFRFDLEYI RARAARHGVR LRWGRDGSEP RVHPSRFAVA ERTIDYPRWN IYGRSVMDTY FLLQIYDVSS RELESHGLKQ AAIHFGLASP DRVYLDRQAM DEVFRSDPEA LRRYNLDDVR ETLALSRLLS YPWFLQARIF PYSYQTCVIR GNATRINALF LREYLRQGAA VPKPAGSVGT FEGGYAAVFE TGVLGPIVHC DVASLYPSIM LAYGLDPRRE HLGLFLPLLA QLRQFRLAAK ERAREAALPH ERDYFNALQQ TFKVLINSFY GYLGTTIHTF SDPGVAAEVT RRGRELIQDM IEWLRRHGAR PVEVDTDGIY FIPPQGIETI GQEEALVREL SATLPEGIAV EMDGRYRAIF SYKIKNYALL DHDGKVIVRG SALRSRGIER YLRDFMAAAV RLLLQGDGAK IPAFHEDCIR RLRNHLIPIE SLARTETLGE APPTYLQKVR QGKRNPSAAF EIALRAERPF RAGDQISYYV TGHGKGVTVY ENCKPVSQYD PTRPDENTEF YLDKLNQLVK RLAAYLPKEP TLFD
|
| |