Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3178 |
Symbol | |
ID | 3741049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3577708 |
End bp | 3580218 |
Gene Length | 2511 bp |
Protein Length | 836 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637780465 |
Product | phosphoglucomutase/phosphomannomutase family protein |
Protein accession | YP_386116 |
Protein GI | 78224369 |
COG category | [G] Carbohydrate transport and metabolism [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1109] Phosphomannomutase [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.335265 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAG TCATTATGGC AGGCGGGTTC GGGACCCGCA TCCAACCCCT CACGAGCAGC ATCCCGAAAC CGATGATCCC GCTGCTGAAC CGCCCCATCA TGCTCCATAT CGTAGAATTG CTGAAGAAGT ACGAGATCAC CGATCTCGTA ATGCTCCTTT ACCACCAGCC GGCGGTCATC AAGAACTTTT TCCGGGACGG CACCGACTTC GGCGTCAAGA TCACCTACGT CACCCCCCTC CAGGACATGG GGACCGCCGG GGCCGTCAAG TGCGCCGAGA AGTTCCTGGA CGAGCGGTTC CTCGTCATCA GCGGTGACCT CCTCACCGAC TTCAACCTCC AGAAGATCAT CGACTCCCAC GAGGACAACA AGGCCCTGGC CACCATCACC CTCACCTCGG TGAAGGACCC GCTCCAGTTC GGGGTCGTCA TCACCGACAA GGAAAAGCGG ATCACCCAGT TCCTGGAAAA GCCGGGGTGG GGGGAGGTGA TATCAGATAC CATCAACACC GGCATCTACG TCTTCGAGCC GGAAATTTTC GCCCATATCC CGGAGGAGGA GAACTACGAC TTCTCCCAGG ACCTCTTCCC GAAACTCCTG GAGCAGCAGA AGCCCCTCTT CGGCTACACC GCAAAGGGGT ACTGGCGCGA CATCGGCAAC ACCGACTCCT ACCGTGAGGC CCATCACGAC ATCTTCAAGG GGAAGGTAAA CGTAAAGATC GACGAGGCGA AGCAGGACCT GGTGGGGAAG GATCTGCGGC TTGGGAGCGA CGTGAACCTG GACGAGCATG TCACCCTGGA GGGAACGGTG GTCGTGGGGG ACAACTCCCA GGTCTTCGAG AGCGCCCACA TCAAGGACAC GGTTATCGGC CGCAACTGTA CCATCGAGCC GGGGGTCCGC CTCAACCGCT GCGTCATCTG GGACAACGTC TACGTGAAGA AGGGGGCGAA GCTCAACGAC GGCGTCCTCT GCAGCAATGT GCGGGTCGGG CACGGGGTCG TCATGGAGGA GGGGGTCATC GTGGCCGACG ACACCTCCAT CGGCGAGGAG GCCTACATCA AGCGGGACGT GAAGATCTGG CCCCGGAAGG TGATCGAGGC CGGGGCCACC GTCACCGGCA ACCTCATCTG GGGTGAAAAG TGGAAAAAGT CCCTCTTCGA GGGGGCCATG GTCAAGGGGC TCACCAACAT GGAGCTTACC CCCGAGTTCG TGGCCAAGCT GGGGTGCGCC TATGGTACCA TGCTCCCCAA GGGGAGCCAT ATCATCTCGG GCCGCGATTC CTACCGCTCC TGCCGGATGC TGAAGCGAAG CTTTATCGGC GGGCTCCTCT CCGCCGGGAT CAATGTACGG GACCTGACCA TGGTGCCGAT GCCGGTCTTG CGCTATAAGC TCCGCACCTT TGGCGAGGTG GGTGGAATCT ACTTCCGCCA GGCCATTGAC GACCCCGCTT CCACCGAGAT TGTCTTCCTG GATGGCGACG GCCTCGACTT CTCCAGTTCC ATGGGGAAGA ACGTGGAGAG AATCTTTTTC AAGGAGAACT TCCGCCGGGC CCACCACACG GAGCCGGGGG CGTTGTCCGA GATTCCACAA CAGGTGACGG ATTTTTATCG TGAGGGGTTC CTCCACACCA TCGGCAAGTC GCCGCTGCAG AAGAAACAGT TCAAGGTGGT GATCGACTTC AACCACTCAT CGGCCAGCCA GCTCCTTCCC GGCATCCTGA CCCAGATGGG GTGCGAGGTC ATCAGCCTCA ACGCCTACGT GGACGAGGAG CGGGGGATCC AGGCAGTGGC TGAACGGCAG CAGAGTCTCG CCCAGCTTTC CAAGATCGTT GCCACCCTGG AGGCAAGCGC CGGGTTCTGG CTCGACCCCG GCACCGAAGG GGTCATCGTG GTGGACGAGA CCGGCAAGGT CTACGAGGGG GCCGAACTTC TGCCGCTCAT GGTGGGGCTT GCGCTCCGCT CGGGCGAGAA GGGGCTCTTC GCGGTGCCGG TGTCGGCCCC CTCGGCCATC GAGCGGATGG TCCAGGAGCG CGGCAGTGCC GTGACCCGCA CCAAGAGCGC CGACCGGGCC ATGATCGAGG CCACCCTCTC CTCCGAGGTG GTCCTTGCGG GGACCATGGA CGGCCGTTTT GCCTTCCCGA AGTTCCAGTC CGCCTTCGAC GGCATGTTCG CCATCGCCAA GACCATCGAG CTGGTGGCCA AGGGGGGGCT CTCCATCTCC AGGGTGGCGG CGGAGATTCC GCAGCGTGTC TTCCTCCAGA CCCGGGTCCC CTGCGTCTGG GACATGAAGG GGGGGATCAT GCGGAAGATG AGCGAGGACA GCCTCGACAA GGAGGCGAGC TTCATCGACG GGATCAAGGT CCATTTCGGC GAGGACTGGG CACTGGTGCT CCCGGACCAG TACCTCCCCT ACGTTCACAT CGTGGCCGAG GCCCGGGATG CCAAGACGGC CCAGAAGCTC CTCGATGAGT ACAAGAAAAA GGTCGAGGGG TGGAAACGGG AACTGCAGTG A
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Protein sequence | MKAVIMAGGF GTRIQPLTSS IPKPMIPLLN RPIMLHIVEL LKKYEITDLV MLLYHQPAVI KNFFRDGTDF GVKITYVTPL QDMGTAGAVK CAEKFLDERF LVISGDLLTD FNLQKIIDSH EDNKALATIT LTSVKDPLQF GVVITDKEKR ITQFLEKPGW GEVISDTINT GIYVFEPEIF AHIPEEENYD FSQDLFPKLL EQQKPLFGYT AKGYWRDIGN TDSYREAHHD IFKGKVNVKI DEAKQDLVGK DLRLGSDVNL DEHVTLEGTV VVGDNSQVFE SAHIKDTVIG RNCTIEPGVR LNRCVIWDNV YVKKGAKLND GVLCSNVRVG HGVVMEEGVI VADDTSIGEE AYIKRDVKIW PRKVIEAGAT VTGNLIWGEK WKKSLFEGAM VKGLTNMELT PEFVAKLGCA YGTMLPKGSH IISGRDSYRS CRMLKRSFIG GLLSAGINVR DLTMVPMPVL RYKLRTFGEV GGIYFRQAID DPASTEIVFL DGDGLDFSSS MGKNVERIFF KENFRRAHHT EPGALSEIPQ QVTDFYREGF LHTIGKSPLQ KKQFKVVIDF NHSSASQLLP GILTQMGCEV ISLNAYVDEE RGIQAVAERQ QSLAQLSKIV ATLEASAGFW LDPGTEGVIV VDETGKVYEG AELLPLMVGL ALRSGEKGLF AVPVSAPSAI ERMVQERGSA VTRTKSADRA MIEATLSSEV VLAGTMDGRF AFPKFQSAFD GMFAIAKTIE LVAKGGLSIS RVAAEIPQRV FLQTRVPCVW DMKGGIMRKM SEDSLDKEAS FIDGIKVHFG EDWALVLPDQ YLPYVHIVAE ARDAKTAQKL LDEYKKKVEG WKRELQ
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