Gene Gmet_3178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3178 
Symbol 
ID3741049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3577708 
End bp3580218 
Gene Length2511 bp 
Protein Length836 aa 
Translation table11 
GC content62% 
IMG OID637780465 
Productphosphoglucomutase/phosphomannomutase family protein 
Protein accessionYP_386116 
Protein GI78224369 
COG category[G] Carbohydrate transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1109] Phosphomannomutase
[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.335265 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAG TCATTATGGC AGGCGGGTTC GGGACCCGCA TCCAACCCCT CACGAGCAGC 
ATCCCGAAAC CGATGATCCC GCTGCTGAAC CGCCCCATCA TGCTCCATAT CGTAGAATTG
CTGAAGAAGT ACGAGATCAC CGATCTCGTA ATGCTCCTTT ACCACCAGCC GGCGGTCATC
AAGAACTTTT TCCGGGACGG CACCGACTTC GGCGTCAAGA TCACCTACGT CACCCCCCTC
CAGGACATGG GGACCGCCGG GGCCGTCAAG TGCGCCGAGA AGTTCCTGGA CGAGCGGTTC
CTCGTCATCA GCGGTGACCT CCTCACCGAC TTCAACCTCC AGAAGATCAT CGACTCCCAC
GAGGACAACA AGGCCCTGGC CACCATCACC CTCACCTCGG TGAAGGACCC GCTCCAGTTC
GGGGTCGTCA TCACCGACAA GGAAAAGCGG ATCACCCAGT TCCTGGAAAA GCCGGGGTGG
GGGGAGGTGA TATCAGATAC CATCAACACC GGCATCTACG TCTTCGAGCC GGAAATTTTC
GCCCATATCC CGGAGGAGGA GAACTACGAC TTCTCCCAGG ACCTCTTCCC GAAACTCCTG
GAGCAGCAGA AGCCCCTCTT CGGCTACACC GCAAAGGGGT ACTGGCGCGA CATCGGCAAC
ACCGACTCCT ACCGTGAGGC CCATCACGAC ATCTTCAAGG GGAAGGTAAA CGTAAAGATC
GACGAGGCGA AGCAGGACCT GGTGGGGAAG GATCTGCGGC TTGGGAGCGA CGTGAACCTG
GACGAGCATG TCACCCTGGA GGGAACGGTG GTCGTGGGGG ACAACTCCCA GGTCTTCGAG
AGCGCCCACA TCAAGGACAC GGTTATCGGC CGCAACTGTA CCATCGAGCC GGGGGTCCGC
CTCAACCGCT GCGTCATCTG GGACAACGTC TACGTGAAGA AGGGGGCGAA GCTCAACGAC
GGCGTCCTCT GCAGCAATGT GCGGGTCGGG CACGGGGTCG TCATGGAGGA GGGGGTCATC
GTGGCCGACG ACACCTCCAT CGGCGAGGAG GCCTACATCA AGCGGGACGT GAAGATCTGG
CCCCGGAAGG TGATCGAGGC CGGGGCCACC GTCACCGGCA ACCTCATCTG GGGTGAAAAG
TGGAAAAAGT CCCTCTTCGA GGGGGCCATG GTCAAGGGGC TCACCAACAT GGAGCTTACC
CCCGAGTTCG TGGCCAAGCT GGGGTGCGCC TATGGTACCA TGCTCCCCAA GGGGAGCCAT
ATCATCTCGG GCCGCGATTC CTACCGCTCC TGCCGGATGC TGAAGCGAAG CTTTATCGGC
GGGCTCCTCT CCGCCGGGAT CAATGTACGG GACCTGACCA TGGTGCCGAT GCCGGTCTTG
CGCTATAAGC TCCGCACCTT TGGCGAGGTG GGTGGAATCT ACTTCCGCCA GGCCATTGAC
GACCCCGCTT CCACCGAGAT TGTCTTCCTG GATGGCGACG GCCTCGACTT CTCCAGTTCC
ATGGGGAAGA ACGTGGAGAG AATCTTTTTC AAGGAGAACT TCCGCCGGGC CCACCACACG
GAGCCGGGGG CGTTGTCCGA GATTCCACAA CAGGTGACGG ATTTTTATCG TGAGGGGTTC
CTCCACACCA TCGGCAAGTC GCCGCTGCAG AAGAAACAGT TCAAGGTGGT GATCGACTTC
AACCACTCAT CGGCCAGCCA GCTCCTTCCC GGCATCCTGA CCCAGATGGG GTGCGAGGTC
ATCAGCCTCA ACGCCTACGT GGACGAGGAG CGGGGGATCC AGGCAGTGGC TGAACGGCAG
CAGAGTCTCG CCCAGCTTTC CAAGATCGTT GCCACCCTGG AGGCAAGCGC CGGGTTCTGG
CTCGACCCCG GCACCGAAGG GGTCATCGTG GTGGACGAGA CCGGCAAGGT CTACGAGGGG
GCCGAACTTC TGCCGCTCAT GGTGGGGCTT GCGCTCCGCT CGGGCGAGAA GGGGCTCTTC
GCGGTGCCGG TGTCGGCCCC CTCGGCCATC GAGCGGATGG TCCAGGAGCG CGGCAGTGCC
GTGACCCGCA CCAAGAGCGC CGACCGGGCC ATGATCGAGG CCACCCTCTC CTCCGAGGTG
GTCCTTGCGG GGACCATGGA CGGCCGTTTT GCCTTCCCGA AGTTCCAGTC CGCCTTCGAC
GGCATGTTCG CCATCGCCAA GACCATCGAG CTGGTGGCCA AGGGGGGGCT CTCCATCTCC
AGGGTGGCGG CGGAGATTCC GCAGCGTGTC TTCCTCCAGA CCCGGGTCCC CTGCGTCTGG
GACATGAAGG GGGGGATCAT GCGGAAGATG AGCGAGGACA GCCTCGACAA GGAGGCGAGC
TTCATCGACG GGATCAAGGT CCATTTCGGC GAGGACTGGG CACTGGTGCT CCCGGACCAG
TACCTCCCCT ACGTTCACAT CGTGGCCGAG GCCCGGGATG CCAAGACGGC CCAGAAGCTC
CTCGATGAGT ACAAGAAAAA GGTCGAGGGG TGGAAACGGG AACTGCAGTG A
 
Protein sequence
MKAVIMAGGF GTRIQPLTSS IPKPMIPLLN RPIMLHIVEL LKKYEITDLV MLLYHQPAVI 
KNFFRDGTDF GVKITYVTPL QDMGTAGAVK CAEKFLDERF LVISGDLLTD FNLQKIIDSH
EDNKALATIT LTSVKDPLQF GVVITDKEKR ITQFLEKPGW GEVISDTINT GIYVFEPEIF
AHIPEEENYD FSQDLFPKLL EQQKPLFGYT AKGYWRDIGN TDSYREAHHD IFKGKVNVKI
DEAKQDLVGK DLRLGSDVNL DEHVTLEGTV VVGDNSQVFE SAHIKDTVIG RNCTIEPGVR
LNRCVIWDNV YVKKGAKLND GVLCSNVRVG HGVVMEEGVI VADDTSIGEE AYIKRDVKIW
PRKVIEAGAT VTGNLIWGEK WKKSLFEGAM VKGLTNMELT PEFVAKLGCA YGTMLPKGSH
IISGRDSYRS CRMLKRSFIG GLLSAGINVR DLTMVPMPVL RYKLRTFGEV GGIYFRQAID
DPASTEIVFL DGDGLDFSSS MGKNVERIFF KENFRRAHHT EPGALSEIPQ QVTDFYREGF
LHTIGKSPLQ KKQFKVVIDF NHSSASQLLP GILTQMGCEV ISLNAYVDEE RGIQAVAERQ
QSLAQLSKIV ATLEASAGFW LDPGTEGVIV VDETGKVYEG AELLPLMVGL ALRSGEKGLF
AVPVSAPSAI ERMVQERGSA VTRTKSADRA MIEATLSSEV VLAGTMDGRF AFPKFQSAFD
GMFAIAKTIE LVAKGGLSIS RVAAEIPQRV FLQTRVPCVW DMKGGIMRKM SEDSLDKEAS
FIDGIKVHFG EDWALVLPDQ YLPYVHIVAE ARDAKTAQKL LDEYKKKVEG WKRELQ