| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3144 |
|---|
| Symbol | |
|---|
| ID | 3740918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 3542348 |
|---|
| End bp | 3543232 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637780431 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_386082 |
|---|
| Protein GI | 78224335 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 89 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAT TTCTGACGGG TGGAACAGGT TTCATCGGCG GTCATGTGAG GAAGGCGTTG
CTGGAGGCGG GGCACCGCAT CAGGCTCCTC GTCCACCGCC GGCACGAGGG GGTCGAGGCA
GGGGTTGAAC AGGCCGAGGG GGACGTGACG CGGCTGGACA CCTTTGCCAC GGCAGTGGAG
GGATGCGACG CGACCATCAA TCTCGTGGGG ATCATCCGGG AGTTTCCCGG GCGGGGAATG
ACGTTCGATA AACTCCACGT GGAGGCGACG CAAAATGTCG TGGAGGCGGC CCGGCGGGCG
GGGATCCGGC GCCATCTCCA GATGTCGGCC CTGGGCTCCC GGCCCAACGC CACCTCTCGG
TACCATCAGA CCAAATGGCG GGCCGAGGAG GAGGTGCGCG CCTCGGGGCT GGAGTGGACC
ATCTTCCGCC CTTCCATTGT CTTCGGTCCC AAGGACGATT TCATCAACAA GCTGGCCGGT
TACATCAGGT CGTACCCGGC AGTGCCGGTC ATCGGCGACG GCAAGTACCG GCTTCAGCCG
GTGGCGGCCG ATGACGTGGC CCGCTGTTTC GTCCTGGCCC TGGAGAAGCC GGAGACGGTG
GGGCAGGCCT ATGAACTCTG TGGCCCCGAC CGCATCTCCT ACAACGACCT TCTCGATACC
ATCGGCCGGA TCGTCGGCAA GGGGCATGTG CCCAAGGTCC CCAACCCCCT GGGGATCATG
AAGCTGGTCG TGCCAGTCAT GCAGGGCTTC TCCTTTTTTC CCATCACCAT GGACCAGATC
ACCATGCTCG TGGAGGAGAA TATCTGCGCG AGCCCCTGGC CCCAGGTCTT CGGTTTCGAT
CCCGAGTGCT TTGAGCTGGG GATTGCCAAG TATCTTCGGC ACTGA
|
|---|
| Protein sequence | MKIFLTGGTG FIGGHVRKAL LEAGHRIRLL VHRRHEGVEA GVEQAEGDVT RLDTFATAVE
GCDATINLVG IIREFPGRGM TFDKLHVEAT QNVVEAARRA GIRRHLQMSA LGSRPNATSR
YHQTKWRAEE EVRASGLEWT IFRPSIVFGP KDDFINKLAG YIRSYPAVPV IGDGKYRLQP
VAADDVARCF VLALEKPETV GQAYELCGPD RISYNDLLDT IGRIVGKGHV PKVPNPLGIM
KLVVPVMQGF SFFPITMDQI TMLVEENICA SPWPQVFGFD PECFELGIAK YLRH
|
|---|
| |