| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3129 |
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| Symbol | |
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| ID | 3740903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3525824 |
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| End bp | 3527164 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637780417 |
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| Product | Outer membrane efflux protein |
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| Protein accession | YP_386068 |
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| Protein GI | 78224321 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000215977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTATT TTTCCGCCGC TTTATTGTTA CTGGTTCTTA CCCCGTCGTT CCTGCTGGCT
GCCGAACCCT CGGTGGCCCT TAACGAGGCC CTGATCCTGG CTCTGAAACA GAACCACCTG
GTGAGCGGCG CCGCTTACGA GAAAGAGGCG GCGGTGGAGG GGGCGGCTGC GAGCCGCAGC
CGGTACCTGC CCCGGATCGT GGCGGAAGAG GCGTTCAGCG CTTCGGACCT TCCCACCCGC
GTTTTCATGA TGAAACTGGA CCAGGGGCGT TTTGCATCGA GCGACTTCGA ACTCGGCAAT
CTGAACACTC CCTCTTCCTA CCATGACTTC CGCACGGCGC TTACCCTGGA ACAGCCCCTC
TTCGACCTGG GGATCGGCTA CGGTCGGGAG ATGGCAGAGC GGGAGGCGGA GCGGATGGGG
TACCGGTTCG AGGGGCGCCG TGAAGATGTG GGGTTCGCAG TTTATGGAGC CTATCTGGGA
GTGCAGCGGG CAAAGGCTGT CCTGGCTGCC GCCGAGAAGG ACGTGGAAGA GGCCCGGGAG
CACCTGCGGG TGGCCACGGT CCGCGGCCAT GAGGGAACCG GGCTCAAGTC CGACGAATTG
CGGGCAAGAA CCTTCCTTTC CGAGGCGGAG GAGCGGACCA TCACCGCCCT CAACGACCTG
AAGCTGGCCA AAATGCGCCT GGCCCTCGCC GTGGGAGGCG GACCCGGGGA ATCCCTCGAT
ATCCGCGGGG ATGTGACGGG TGAGGCGTTC CGCTTGAACG AGGATGAGAT CGTGCGCCAG
GCCGTTGCCA ACCGCCGGGA CCTGAAGGGG GCCGAAAAGG GGGTGGAGCG GGCCGCGGCC
GCCGTGGGGC TCGCCCGTAG CGCCTGGTTC CCCACGCTTT ACGCCGCTGC GTCCGTGCAG
ATGAACGACA GGGATGTTCC CTTCGGTCGC GATAACGACG GGTGGAGCGC CGGGGTGAAC
CTGCGCTGGG AGGTCTTTGA CGGCATGGGA AGGATGCACG GGGCGGCCAA GGCACGGGCC
GAGCGGGACG CTGCCGCCCA GTACCTGGAG CAGTTCCGCA AGGAAGTGGA CCTCCAGGTG
CGGGAGAGCA TTCTGCGCCG GGCCGAGGCG GGAAAACGGC TGGAGGTGGC GCGCCATGCG
CTTCTGGCGG CCGAGGAGGG ATCCCGGCTC GTGAACAAGC GCTTCGCCAA CGGCCTCGCC
ACCATGGTGG AGCTTCTGGA TGCCCAGTCG GCCCTCAGCC GGGCGAGGAC CGGACTCGTG
GAGCGAGAGG CCGACCACCT GCTGGCAACG GCCCGGATAT ATTACACCGC CGGCATATTC
CTGAAGGAGA TGGCACCATG A
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| Protein sequence | MKYFSAALLL LVLTPSFLLA AEPSVALNEA LILALKQNHL VSGAAYEKEA AVEGAAASRS
RYLPRIVAEE AFSASDLPTR VFMMKLDQGR FASSDFELGN LNTPSSYHDF RTALTLEQPL
FDLGIGYGRE MAEREAERMG YRFEGRREDV GFAVYGAYLG VQRAKAVLAA AEKDVEEARE
HLRVATVRGH EGTGLKSDEL RARTFLSEAE ERTITALNDL KLAKMRLALA VGGGPGESLD
IRGDVTGEAF RLNEDEIVRQ AVANRRDLKG AEKGVERAAA AVGLARSAWF PTLYAAASVQ
MNDRDVPFGR DNDGWSAGVN LRWEVFDGMG RMHGAAKARA ERDAAAQYLE QFRKEVDLQV
RESILRRAEA GKRLEVARHA LLAAEEGSRL VNKRFANGLA TMVELLDAQS ALSRARTGLV
EREADHLLAT ARIYYTAGIF LKEMAP
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