| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3084 |
|---|
| Symbol | |
|---|
| ID | 3740782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 3480960 |
|---|
| End bp | 3482117 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637780372 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_386023 |
|---|
| Protein GI | 78224276 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1565] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATCAGC CGGACGACAA CAGGCTCAGG GGGATCATTC TCAACCGGAT TCGGGAGCAG
GGGCGAATTC CCTTTGCCGA CTTCATGGCG ATGTGCCTCT ACGAGCCGGG GCTCGGCTAC
TACACCTCCC CCGGCCGCAA GGTGGGGGCC GAGGGGGATT TCTACACCAG CATCAACGTC
CACTCCGTTT TCGGACGCCT CATTGCCCGG GAGATCTGCC GCATGTGGGA GGAGATGGGG
CGCCCCGCCT CCTTCGACAT CGTGGAGGCC GGGGCAGGCC ACGGCCGTCT CGCCACCGAT
GTCATCGACG CCATCCAGGA GCTGAACCCC ACCCTCTACG ACGGCATCCG CCTCACCCTC
ATCGAGGCCG AGCCGAGCCT TGCCGCAGTG CAGGGGGAGC TCCTCGCCCC GCATCTTCCC
AAGGTCTCCT GGAGCACCCC CGCCGACCTG GCCGAGGGGC GGCTCCGGTT CACCGGCTGC
CTCTACTCCA ACGAACTGAT CGACTCCTTC CCGCCCCACC TGGTCGAAAT GGGCCCCGAG
GGGCTGCGCG AGGTCTTTGT CGCGGCCGAG GGGGACCAGT TCTCAGAAAT CCTCGACCTC
CCCTCAACGC CGGAGCTGGA GGCGTACCTC TCCCGTCTCG GCATCACCTT CGCCGTGGGA
CAGCGGGCCG AGATCAACCT GAACGCCGTC CGGTGGCTTG AATCGGTGGC CACTGCCTTG
GAACGGGGCT TCGTCCTCAC CATCGACTAC GGCTACCTGG CCCCCGAGCT CTACGGCCCC
ATGCGCCTGA ACGGCACCCT CCTCTGCTAC TACCGCCATA CCATCGAAGA GAACCCCTAC
ATCCGGATCG GTCTCCAGGA CATGACCACC CACGTGGACT TCACCACCCT TGCCGCGCGG
GGGGAGGAAC TGGGGCTGCG CAAGGTCTGG TACGGCGAGC AGTACCGCTT CCTGGTGGCC
ACCGGCATGA TGGAGGAGCT CATGGCCCTG GAGGCCGCCG CCACATCGGA AAAGGAGCAG
ATCGCCATCC GCCTCGCCCT CAAGAAGCTC ATCCTCCCCG AGGGGGGGAT GGGGGACACC
TTCAAGGTCC TCGTCCAGGC GAAAGGGGTC GAAAACCCCC GGCTCCTCTG CATGCGCGAC
TGGGGCAAGC TCTTTTGA
|
|---|
| Protein sequence | MDQPDDNRLR GIILNRIREQ GRIPFADFMA MCLYEPGLGY YTSPGRKVGA EGDFYTSINV
HSVFGRLIAR EICRMWEEMG RPASFDIVEA GAGHGRLATD VIDAIQELNP TLYDGIRLTL
IEAEPSLAAV QGELLAPHLP KVSWSTPADL AEGRLRFTGC LYSNELIDSF PPHLVEMGPE
GLREVFVAAE GDQFSEILDL PSTPELEAYL SRLGITFAVG QRAEINLNAV RWLESVATAL
ERGFVLTIDY GYLAPELYGP MRLNGTLLCY YRHTIEENPY IRIGLQDMTT HVDFTTLAAR
GEELGLRKVW YGEQYRFLVA TGMMEELMAL EAAATSEKEQ IAIRLALKKL ILPEGGMGDT
FKVLVQAKGV ENPRLLCMRD WGKLF
|
|---|
| |