Gene Gmet_3053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3053 
Symbol 
ID3741060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3449164 
End bp3449706 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content52% 
IMG OID637780342 
ProductSNase-like nuclease 
Protein accessionYP_385993 
Protein GI78224246 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.1276200000000001e-18 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.298628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGAAAC GAATTTGCGG TGTTGTCCTG TTATGGATAA TCCTTATTTC TCTGCCGGTA 
TGGGCAAAGG AGCCCTTGCG GATCATCGAG GGGGAAGTGG TGAAGGTCGT CGATGGCGAC
ACGATCACCA TCGATTCCGA GGGAACAAGG GTCAAGGTTC GACTGTATGG TATCGATGCT
CCTGAAACTG AGAAAATCAA CAGAAAGACC GGTGTGGTTA CAAAGCCAGG ACAACCTTTC
GGTGAAGAGG CGTTTCATGC TCTTGCTGAC AAGGTTTCGA ACAAGTCGGT ACGACTTGAG
GTGATGGGCA TCGACAAGTA TCGACGATCG GTTTCCTTTG TCTGGTTGGG GGATCGGAAT
ATCAATCGGG AAATGGTTCG AGAGGGATGG TCATGGGCAT TCCGGAAGTA CCTCGACCGT
TTCAGTGCAT ATTTCCTTGA TGACGAGGAC ATCGCCCGCA GTGAGAAACG AGGGATCTGG
CAAGATGCCG ATCCTGAACC CCCATGGGAA TTCCGGAAAC GGACCAAGAC AAGCGGGGGC
TGA
 
Protein sequence
MMKRICGVVL LWIILISLPV WAKEPLRIIE GEVVKVVDGD TITIDSEGTR VKVRLYGIDA 
PETEKINRKT GVVTKPGQPF GEEAFHALAD KVSNKSVRLE VMGIDKYRRS VSFVWLGDRN
INREMVREGW SWAFRKYLDR FSAYFLDDED IARSEKRGIW QDADPEPPWE FRKRTKTSGG