Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3038 |
Symbol | |
ID | 3741234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3423571 |
End bp | 3424782 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637780327 |
Product | secretion protein HlyD |
Protein accession | YP_385978 |
Protein GI | 78224231 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000000167095 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAT TCCTCATCCC CGCCGCTGCC GTCCTCGTGG TGGCCGGCGT TGCCGCGTAC TTTACCCTGA ACAAAAAGCC GGAAACTGTG TTCAAGACCG CCAAGATCGA GCGGGGGGAT ATTGTCTCCA CTGTCTCCGC CACCGGCAAC CTTGCCGCCG TGGTGACGGT ACAGGTGGGT ACCCAGGTTT CCGGCACCAT CCAGAAGCTC TTTGTGGACT ACAACTCGCC GGTGAAAAAG GGGCAGGTCA TCGCCCAGAT CGATCCTTCC CTGTTTTCGG CCCAGGTGGA GCAGACCCGG GGAAACTACC TGAACGCCCA GGCCAACCTC CAGAGGGTGA GGGCTGATCT GGCAGATGCC CGGCGCAACC AGGAGCGGAA CCGCCAGCTC CTCAAGGACG GCGTCGTCTC CCAGAGCGAT TTTGACGCCG CCGACAACCG CTACCAGATG GCCCAGGCCA CCGTGAAAGC AGCCGAGGGA AGCGTGGCCC AGACCCGCGG CGCCTTCAGC CAGTCGGAGA CCAACCTCCG CTATGCCACC ATCCGTTCGC CCGTGGACGG CATCGTCGTC TCCCGCAACG TGGACGTGGG GCAGACCGTG GCCGCCTCGT TCCAGACCCC GACCCTCTTC ACCATCGCCC AGGACCTGAC CCGCATGGAG ATCGACACCA GCGTGGACGA GGCCGACATC AGCCGGGTGC AGGTGGGGCA GCCGGTCAGC TTCACCGTGG ACTCCTATCC CGAGAACCGC TTCACCGGCA CCGTCCGCCA GGTGCGCAAC GCACCGGTGG TCACCCAGAA CGTCGTGACC TACGTGGTGG TGATCGACGT GGACAACAAG GACATGAAGC TCAAGCCGGG GATGACCGCC AATGTCAGCA TCGAGACCGC CCGCAAGGAC AATGTCCTGA AGCTCCCTTC CGCTGCGCTC CGGTTCCGGC CCAAGAAGGG GGGTGATGAG AAGGCGGCGA AGGGACAGCA GGCTGGCCAG GAGCAGCGGA GGAAAAAGCG GGAAGGTGGG CAGCAGGTCT ACATCCTGGG GGCGGAGAAC AAGCCGGTTC CGGTGCCGGT TAAGACCGGC ATCGGCAACG ATGGGCAGGT GGAACTGGTT TCCGGGAACC TCAAGGAAAA CGACCAGGTG ATCATCGAAC AGGTTACCCC GCAGCAGAAA AAAGCGGGCG GCATGGGCGG ATCCATGGGG CCGAGGTTCT AG
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Protein sequence | MKKFLIPAAA VLVVAGVAAY FTLNKKPETV FKTAKIERGD IVSTVSATGN LAAVVTVQVG TQVSGTIQKL FVDYNSPVKK GQVIAQIDPS LFSAQVEQTR GNYLNAQANL QRVRADLADA RRNQERNRQL LKDGVVSQSD FDAADNRYQM AQATVKAAEG SVAQTRGAFS QSETNLRYAT IRSPVDGIVV SRNVDVGQTV AASFQTPTLF TIAQDLTRME IDTSVDEADI SRVQVGQPVS FTVDSYPENR FTGTVRQVRN APVVTQNVVT YVVVIDVDNK DMKLKPGMTA NVSIETARKD NVLKLPSAAL RFRPKKGGDE KAAKGQQAGQ EQRRKKREGG QQVYILGAEN KPVPVPVKTG IGNDGQVELV SGNLKENDQV IIEQVTPQQK KAGGMGGSMG PRF
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