Gene Gmet_3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3008 
Symbol 
ID3740997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3392265 
End bp3392720 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content65% 
IMG OID637780297 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_385948 
Protein GI78224201 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.223129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGG TTATCCAGCG GGTAAGCGAG GCCAGGGTGG TGGTGGACGG CGAGGTTGTG 
GGAGCCATCG AGCGGGGAAT TCTGGTCCTT CTCGGGGTGG AGAAGGGGGA CGCGGAGCGG
GACGCGGCAT GGCTGGCGGA AAAGGTCGCG GGGCTGCGGA TTTTCGAGGA CGAGGCGGGG
AAGATGAACC TGTCGGTGCG GGAGGTGACC GGCGGGATCC TCGCCGTGTC CCAGTTTACC
CTGGCGGGGA ACTGCGCCAA GGGGCGGCGC CCATCCTTCG ACACGGCGGC ACCACCCGAC
GAGGGGAAGC GGCTCTATGG CCGTTTCGTT GATTTCATGC GGGAAACCGG CATCCCCACG
GCCACGGGGA TCTTCCAGGC GGACATGAAG GTGCATCTGG TGAACGACGG GCCGGTGACA
TTTATCCTGG AGAGTCCGAA GGCTACCGGG GGATAA
 
Protein sequence
MKAVIQRVSE ARVVVDGEVV GAIERGILVL LGVEKGDAER DAAWLAEKVA GLRIFEDEAG 
KMNLSVREVT GGILAVSQFT LAGNCAKGRR PSFDTAAPPD EGKRLYGRFV DFMRETGIPT
ATGIFQADMK VHLVNDGPVT FILESPKATG G