| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2994 |
|---|
| Symbol | |
|---|
| ID | 3740983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 3378520 |
|---|
| End bp | 3379377 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637780283 |
|---|
| Product | endonuclease IV |
|---|
| Protein accession | YP_385934 |
|---|
| Protein GI | 78224187 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0648] Endonuclease IV |
|---|
| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.097029 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.446678 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTACT TCGGCGCCCA CATGTCCATC GCCGGCGGTC TCCACAACGC CCCCGACCGG
GGGGTGAAGG TGGGGTGCGG CGTCATCCAG ATCTTCACCC AGAACTCCAA CCAGTGGCGG
GGGAAAATCC CCAGTGACTC CGACGTGGCC CTCTTCCGGG AGAAGTGGGC GGAATCGGGG
CTCCACGAGA TCATCTGCCA CGACATCTAC CTCATCAACC TGGCGGCCCC GGAGGGGGAG
ACCCGTGACA AGAGCCTCCT CTCCTTCCGG GAGGAGATGG AGCGTTGCGC CCGCCTCGGC
ATCGACAAGA TCGTCATGCA CCCGGGCGCC CATGTGGGAG ACGGCGAGGA GACCGGCATC
AAGCGCATCT GCGAGGCCTT CGACGCGCTC ATCCCCGCGG TCCCCGAGTT CACCGGGAAG
ATCCTCCTGG AGACCACCGC CGGCCAAGGG ACGAACCTGG GGTACACCTT CGAGCACCTG
CGGGCCATCA TCGACGGCTC CGCGCACCCC GACCGCTTCG CCGTCTGCTA CGACACCTGC
CACACCTTCG CCGCCGGCTA CGACATCACT ACGCCGGAAG GGTACAAGCA GGTCTTCGCC
GACTTCGACC GGATCATCGG CATCGACAGG CTCCAGTGCT TCCACATCAA CGACTCCAAG
AAGGGGCTCA ACTGCCGGGT CGACCGCCAC GAGCACATCG GCCAGGGGGC CATGGGGCTC
GAAGGGTTCC GCACCCTGGT CAATGACCCG CGATTCGCCA AGGTCCCCAA AATTCTCGAA
ACCCCCAAGG GAGACAACGA CGAGTTCGAC GTCATGAACC TGAAGACGCT CCGGGGACTG
ATGGCAGGAA AGAACTGA
|
|---|
| Protein sequence | MDYFGAHMSI AGGLHNAPDR GVKVGCGVIQ IFTQNSNQWR GKIPSDSDVA LFREKWAESG
LHEIICHDIY LINLAAPEGE TRDKSLLSFR EEMERCARLG IDKIVMHPGA HVGDGEETGI
KRICEAFDAL IPAVPEFTGK ILLETTAGQG TNLGYTFEHL RAIIDGSAHP DRFAVCYDTC
HTFAAGYDIT TPEGYKQVFA DFDRIIGIDR LQCFHINDSK KGLNCRVDRH EHIGQGAMGL
EGFRTLVNDP RFAKVPKILE TPKGDNDEFD VMNLKTLRGL MAGKN
|
|---|
| |