| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2941 |
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| Symbol | glyS |
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| ID | 3740835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3330385 |
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| End bp | 3332445 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637780233 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_385884 |
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| Protein GI | 78224137 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.125162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.000287233 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGAGT TGTTCCTTGA GATAGGCACC GAAGAGATCC CGGCGGGCTT CATCCCGAAG
GCCATGGCCG ATATGGAGGC CCTGCTGGCG AAGGAGCTTG AGAATGCCCG CATCTCCTTC
GACGACATCC GGACCCTCGG CACCCCCCGT CGCCTGGCCC TGACGGTGAA GGGTCTTCCG
ACGGTCCAGC CCGATGCGGA GATCACTGCC ATGGGGCCGG CCAGGAACGT AGCCTTCGAC
GCCGAAGGAA AACCCACCAG GGCTGCCGAA GGGTTTGCCC GGGGGCAGGG GGTGGACGTG
GCGTCCCTCA CCCTCGTCGC CACTGAAAAG GGTGAGTACG TGGCCGCCGT CCGCAAGGAG
AGCGGTCGCC CCGTGCCGGA GCTCCTGGCC GAGATCCTGC CGCGGCTTGT TGCGAATATC
CCTTTCCGCA AGTCCATGCG CTGGGGTGCT CTCGACGTCC GCTTCGCCCG CCCCATCCAC
TGGATCGTGG CCCTCTTTGA CGGCGTCGTG GTTCCCTTCA CCTTCGGGAA CATCGAAAGC
GGCACCATTT CCCGGGGGCA CCGCTTCATG GCCAACCAGC CCTTCCCGGT GCGGGACTTT
GCCCACTATC TGGAGGAGTG CGAGCGCCAC TTCGTCATTC CCGACCCGGA ACGGAGACAG
GAGATCATCC GGCGGGAGAT CCACCGGGTT GCCAAGGCCG CCGGCGGGCA TCTTCTCCCC
GACGAGGGGC TTCTGGAGGA GGTCTCCTTC CTCTGCGAGT ACCCGAGCGC GGTTCACGGC
ACCTTTTCCG CCGAGTTCCT GAAGGTTCCC CGGGAGGTTC TCATCACCTC CATGCGGAGC
CACCAGCGTT ACTTCTCCAT TGTCGACGAC GCCGGTAAGC TCATGCCCGG TTTCATCACC
ATCAACAACA CCCTCACCGA GGATCCCACC GTGGTGGTCA AGGGGAACGA GCGGGTGCTC
AGGGCCCGGC TCTCCGATGC CCGTTTCTTC TTCGAGGAGG ACCAGAAGGT CAAGCTGGAG
ACCCGGGTGG AGTCCCTGAA GAACGTGGTC TACCAGCAAA AGCTCGGCAC CTCCTTTGAA
AAGATGGAGC GGTTCCGTGC CTTGGCCGAG GGACTTGCCG ACCTCCTGAA CCCGGCGGTG
AAAGTGAAGG TTTCCCAGGC CGCGTTCCTC TGCAAGGCGG ATCTCGTCTC CGGCATGGTG
GGTGAGTTCC CCGAGGTGCA GGGGATCATG GGGCGCGAGT ACGCCCTCAT CGAGGGGGAG
GACGCCGAGG TGGCCGCGGC CATCGCCGAG CACTACCTCC CGACCCAGGC GGGGGGCGAG
CTGCCGGCGT CGGACATTGG CGCCTTCGTC TCCATGGCCG ACAAGCTGGA CACCATCTGC
GGCTGCTTCG GCGTGGGGCT CATCCCCACC GGTTCCGCCG ACCCCTACGC CCTGCGCCGC
TCGGCCCTGG GGATCATCAA TATCATTCTC GACAAGGGGT ACCGCCTCTC CCTGGAGGAG
CAGGTGGACA AGGCCCTTGG CCTTCTGGCC GCCAAGCTCA CCCGGCCGGC CGTTGACGTG
AAGGCCGACG TTCTGGAGTT CTTCCGGGGC CGGTTCGTGA ACCTGATGGC CGACCGCCAT
GCCTCCGACG CGGTGGATGC CGCCGTGGCC GCCGGCTGCG CCGATCTCGT GGATGCCGCC
GCCCGGATCG CGGCCCTTTC GGAGTTCAGG TCGCACCCCG ACTTCGAGCC TCTGGCCGTG
GCCTTCAAGC GGGTCGGCAA CATCGTGAAG GAAGGGGTGG ACGCCCCTGT GGATACGGCT
CTCTTCCAGG ACGCCGCCGA GGGGCTCCTC AACGATGCCG TCCAGGGGGT TGCCGTATCG
GTGCGCGAAA AGATCGCAAC CGGAGCCTAT CTGGAAGCCC TCACGGAGAT CGCCGCCCTG
CGGGGACCCG TCGACACCTT CTTCGACAAG GTCATGGTCA TGGCCGAGGA CGAACGGGTC
CGGACCAACC GTCTGGCGCT CCTGACCGGG ATCGCCCGGA TGCTCGGCGC CATCGCCGAC
TTCGCCAAGA TAGCCGCCTA G
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| Protein sequence | MKELFLEIGT EEIPAGFIPK AMADMEALLA KELENARISF DDIRTLGTPR RLALTVKGLP
TVQPDAEITA MGPARNVAFD AEGKPTRAAE GFARGQGVDV ASLTLVATEK GEYVAAVRKE
SGRPVPELLA EILPRLVANI PFRKSMRWGA LDVRFARPIH WIVALFDGVV VPFTFGNIES
GTISRGHRFM ANQPFPVRDF AHYLEECERH FVIPDPERRQ EIIRREIHRV AKAAGGHLLP
DEGLLEEVSF LCEYPSAVHG TFSAEFLKVP REVLITSMRS HQRYFSIVDD AGKLMPGFIT
INNTLTEDPT VVVKGNERVL RARLSDARFF FEEDQKVKLE TRVESLKNVV YQQKLGTSFE
KMERFRALAE GLADLLNPAV KVKVSQAAFL CKADLVSGMV GEFPEVQGIM GREYALIEGE
DAEVAAAIAE HYLPTQAGGE LPASDIGAFV SMADKLDTIC GCFGVGLIPT GSADPYALRR
SALGIINIIL DKGYRLSLEE QVDKALGLLA AKLTRPAVDV KADVLEFFRG RFVNLMADRH
ASDAVDAAVA AGCADLVDAA ARIAALSEFR SHPDFEPLAV AFKRVGNIVK EGVDAPVDTA
LFQDAAEGLL NDAVQGVAVS VREKIATGAY LEALTEIAAL RGPVDTFFDK VMVMAEDERV
RTNRLALLTG IARMLGAIAD FAKIAA
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