| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2889 |
|---|
| Symbol | |
|---|
| ID | 3740800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 3270172 |
|---|
| End bp | 3270780 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637780180 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_385832 |
|---|
| Protein GI | 78224085 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 62 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.0208213 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATA AGACCGATAA GGCGTTAGAT TCCTACCGTT CCTTTCTCCT CCTCTCGGAA
ATCGCCGGCG AGGAGCCCCT TTCCCAGCGG GAACTCTCCC GCCGGGCCGG CATTGCCGTC
GGACTAGTGA ACTCCTACCT AAAAAACCTC GTGGCCAAGG GGTACGTCCG CGTCAAGAAC
TTCCCCCGCA ACCGCTACGC CTACCTTCTT ACCCCTACGG GGATCGCCGA AAAGAGCCGG
CTCGCCTACC AGCATCTCAG TTATTTTACC AATCTCTACA CCGTTGCTCG GCAGGACTAT
CTGGCGTTGT TTCAGTCTCT CAAGGCAGAG GGGGTGACGG AGGTTGTGTT CTGTGGGGTT
GACGAGGTGG CGGAGATTGC GTACCTCTCA CTGCGGGAAG CGGGATTGGA GTTGGTCGCG
GTTTTGGATG ATCAAGGTCA TGGGAATAGT TTTTTTGGGG TCAGGGTCAT GCCCTTGATT
GTATGGGAGC AGCGGGGCAA CGAGCCGATA GTTGTTACGT CACTAAAGCG CGGGGATGAA
CTGATTGAGG GACTAAAAAA GGCCGGTGTT AATGGTTGGC GGTTCATTGT CGCTCCACGT
GGGTGTTGA
|
|---|
| Protein sequence | MNDKTDKALD SYRSFLLLSE IAGEEPLSQR ELSRRAGIAV GLVNSYLKNL VAKGYVRVKN
FPRNRYAYLL TPTGIAEKSR LAYQHLSYFT NLYTVARQDY LALFQSLKAE GVTEVVFCGV
DEVAEIAYLS LREAGLELVA VLDDQGHGNS FFGVRVMPLI VWEQRGNEPI VVTSLKRGDE
LIEGLKKAGV NGWRFIVAPR GC
|
|---|
| |