| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2838 |
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| Symbol | |
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| ID | 3741144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3217388 |
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| End bp | 3218278 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637780123 |
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| Product | pseudouridine synthase, RluD |
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| Protein accession | YP_385781 |
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| Protein GI | 78224034 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000000000325771 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 1.22587e-21 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCTCACGT TCACCATTAC AGAATCCGAT CACTGCCGCG GGGTGGAAAG CTTCCTCAGG
AACCTCCTCC CGGGCGCTCC CCTCGCCTAC CTCGGCAAGC TCACCCGTGG TGGGCACCTG
ACCGTTAACG GCCTCCCGGT CACACCCGAC ACCCTCCTCG TGACAGGTGA CACCATGGCT
CTCAAGGAAA GCGGCCGGAC AAGGGAACTC CTGGCCGCCA AACGTCCCTC CCTCGATATC
CTCTTCGAGG ACGACCGGAT TGTCGTCGTC AACAAGCCCC CCGGGCTGCC GGTGCACCGG
ACCGCCGAAG ACGAGCAAAC CCTCGTGGAT GTGGCGGAAC GGTTCCTGGC GCAGCGGGGC
ACCCCTGCGA AGCTCCGCCC CGTGAACCGC CTCGACCGCG GCACCTCCGG CGCCACGATA
CTCGCCAAGA GCGCCACGAG TGCCGGCATG TTTGGCCGCT TCGTCAAGGA AACCGGCCTT
GGCAAGCTCT ACCTGGCTGT TGCAGACGGC AAACTGCCAG CCGAAGGGAC CATCGATACC
CCCCTGGAAG GCAAGGAGGC GCAGACCCAG TACCGCACAC TGTTCCAAGG AAAGAGTGCT
GCCCTGCTCC TCGTCACCCC CATAACCGGC CGTACGCACC AAATTCGCAA ACACCTCGCC
CTCACCGGCC ACCCAGTGCG AGGCGACCGC CGCTACCGGG GCGCTCCCCT GGCGGCCTAT
CCAGGGCACT GCCTCCACGC CTTTCTTGTT TCCTTCCGTC ACCCCGTTTC CGGCGAAGAG
ATCGTCATTC ATGCCCCTCT TCCCGCGGCG TTGCTAGAAG AGGTGCGCCT GTTGTCCGGC
GACTTCTATT CCCGCATACT CCTCTCGCTG CCGTCACTGC CGGTGACATA A
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| Protein sequence | MLTFTITESD HCRGVESFLR NLLPGAPLAY LGKLTRGGHL TVNGLPVTPD TLLVTGDTMA
LKESGRTREL LAAKRPSLDI LFEDDRIVVV NKPPGLPVHR TAEDEQTLVD VAERFLAQRG
TPAKLRPVNR LDRGTSGATI LAKSATSAGM FGRFVKETGL GKLYLAVADG KLPAEGTIDT
PLEGKEAQTQ YRTLFQGKSA ALLLVTPITG RTHQIRKHLA LTGHPVRGDR RYRGAPLAAY
PGHCLHAFLV SFRHPVSGEE IVIHAPLPAA LLEEVRLLSG DFYSRILLSL PSLPVT
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