| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2779 |
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| Symbol | |
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| ID | 3739282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3143176 |
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| End bp | 3144537 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637780064 |
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| Product | ribonuclease BN |
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| Protein accession | YP_385722 |
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| Protein GI | 78223975 |
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| COG category | [K] Transcription
[S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein
[COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00809939 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAAA GAGAAACTGC GGTGGACAGG ATCATAGGGT TTTTCACCCA TGCCCTCTGG
GAGATGGAGC CCGACTCCTT TGGCCCGGTG AAGGGGCGCC TGCTGCGGTG TCTGCAGATC
GGCGCCCTGG TGGTCAAGGA CTTTCTGGAC GACCAGTGCC TCATCCGGGC TTCAGCCCTG
GCCTTCTCCA CCCTCCTCTC CATCGTCCCG TTCTTTGCCC TTGCTTTCGC GGTATTGAAG
GGGTTTGGAG TCCAGAACAC CCTGGAACCG TTTATCCTCG ACCAGGTGGC AGCCGGCTCC
CACGAGATCG TCGACAAGAT CGTCGCCTAC ATCAACAACA CCAAGGTCGG ATCCCTCGGC
GCCATCGGCC TTGCGGCCCT CTTTGTCACG GTCGTGACGC TCCTCGGCAA CGTCGAGGAG
GCCTTCAACG CCATCTGGGG GGTCCGGGAG ACCCGTTCCC TCTACCGCAA GTTCAGTGAT
TACCTGAGTG TGCTGGTGAG CGGCCCGATC CTTCTTTTTG CCGCGGTGAG CACGACCACC
ACCATTGAAA GCCAGGCGTT CGTCCAGTGG ATCATGGGAT ACACGTATCT CGGCGATGCG
CTGCTGGCCC TTTTTCGCCT GGTTCCCTAC CTCAGCATCT GGATCGCCCT CGTCTTTCTC
TACATGTTCA TCCCCAATAC CAAAGTCCGC TTCCGCTCGG CCCTTGTGGG AGGGATTATC
GCCGGTACGA TCTGGCAGGG CGCCCAGTGG GGGTACATCC ACTTTCAGGT GGGGGTGGCA
AAGTACAACG CCATCTACGG GACACTGGCG GTGCTGCCGG TCTTCATGGT CTGGCTGTAC
GCCAGCTGGG TCATTGTTCT TCTGGGGGGG GAAGTGGTTT ACGCCCATCA ACACCTGCGG
ACCTTCCGGC GCGAAGTGCG CACCCCCGCC ATCAGCAACG CGGCCCGGGA GCGCCTGGCC
TTGGCCGTCA TCTACGAGAT TTCCCTGGCG TTCCATAATG ATCGCCCGCC CTGGAGCATC
ACCGGGCTTG CCGAGCACCT CGATGTGCCT GAGCGTTCCG TGAGGGAGCT CCTCGAATGT
CTGGAAGACG AAGGAGTCCT GGCGGCGGGG TGCGGCGATG ATCCCCTCTA CCTGCCGGCC
CGGGACCTGG AGCACATCAG GGTCGGGGAG GTGCTCTCCT CCCTGAGGAA TCAGGGAGTC
GGGCTGCCCG GCCAGCTGGG AGGAGAGGAT CATGTTGTCG TGGACGATCT CTGGGAAGCC
ATCGAGGCGG CGGTTCGGAG TGCCCTGGGT GATCTGAGTT TTCGGGACCT GGCGGAGCGG
GTGCCGTTGG CAGGTGAACC TCTGTCGAGG CGCGATTCAT GA
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| Protein sequence | MAQRETAVDR IIGFFTHALW EMEPDSFGPV KGRLLRCLQI GALVVKDFLD DQCLIRASAL
AFSTLLSIVP FFALAFAVLK GFGVQNTLEP FILDQVAAGS HEIVDKIVAY INNTKVGSLG
AIGLAALFVT VVTLLGNVEE AFNAIWGVRE TRSLYRKFSD YLSVLVSGPI LLFAAVSTTT
TIESQAFVQW IMGYTYLGDA LLALFRLVPY LSIWIALVFL YMFIPNTKVR FRSALVGGII
AGTIWQGAQW GYIHFQVGVA KYNAIYGTLA VLPVFMVWLY ASWVIVLLGG EVVYAHQHLR
TFRREVRTPA ISNAARERLA LAVIYEISLA FHNDRPPWSI TGLAEHLDVP ERSVRELLEC
LEDEGVLAAG CGDDPLYLPA RDLEHIRVGE VLSSLRNQGV GLPGQLGGED HVVVDDLWEA
IEAAVRSALG DLSFRDLAER VPLAGEPLSR RDS
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