| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2692 |
|---|
| Symbol | |
|---|
| ID | 3740057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 3038434 |
|---|
| End bp | 3040092 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637779977 |
|---|
| Product | AMP-binding domain protein |
|---|
| Protein accession | YP_385635 |
|---|
| Protein GI | 78223888 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.262026 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.421392 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAAC ATCTTGATTT TACGATCGGT GGACTGCTCG ACCACATGGC TGTAACGTTT
CCCGACAATG ATGCCCTTGT CTACCCGGAA CGGGGGCTCC GGTACTCCTA CCGGCAGTTC
AATGATATCT GCCGCCAGGT GGCCAAGGGG TTGCTGAAGC TCGGCGTCAG GAAGGGAGAC
CACGTGGCCA TCTGGGCCTA CAACGTTCCC GAGTGGGTCA TTCTCCAGTT CGCCACCGCC
AAGATCGGCG TCGTTCTGGT GACGGTCAAC ACTGCCTACA AGTCGGCGGA ACTGGAATAC
CTCCTTGACC AGTCCGATTC CACCACTCTC TTCATGGTCC GGTCCTGGAA GGACACGGAC
TATGTGGCGA CCCTTTCCGA GGTGGTGCCA GAGCTGGCAT CGGCCGAAGC GGGTCTCCTC
ACTACTCCCA AGCTCCCCTT CCTGAAAAGA GTTGTCTTTA TCGGTGAGGA TACGCCGGCA
GGGATGCTCA ATTTCGAGAA GATCGCGGAG ATGGGGAAAG AGGTGCCCGA TGAGCAGCTG
GCGGCAGTTG AGTCCTCCCT TGATGTCCAC GATGTCATCA ATATGCAGTA CACTTCCGGC
ACCACCGGCT TTCCCAAGGG GGTCATGCTG ACCCACTACA ACCTGGTCAA CAACGGCTAT
CACATTGGCG AGTGCATGAA GTTCACGGAT AAGGACCGGC TCTGCATCCC CGTTCCCTTC
TTCCACTGCT TTGGCTCTGT GCTGGCTGTC ATGGCCAGCG TTACTCACGC CACCGCCATG
GTGCCGGTGG AGATTTTCGA CCCGCTCAAG GTTCTTCAGA CCGTTGAAAA GGAGCGCTGC
ACCGCCGTTC ATGGCGTGCC GACCATGTTT ATTGCTGAGC TGGAGCATCC GGATTTCGCG
AAGTTCGATC TCTCCACCCT CCGCACCGGC ATCATGGCCG GCTCGGTCTG TCCCATCGAG
GTCATGAAAC GGTGCGTCAA GGATATGAAC CTGACCGAGC TTACCAGTGT CTATGGGCAG
ACCGAATCCT CCCCGGGAAT CACCCAGACC CGCACCGAGG ATTCGGTTGA GCTGCGCGTC
TCCACTGTCG GGCGGGCGCT CCCCGGCGCC GAAGTAAAGA CCGTCGATAT CGAGACCGGC
GCCACGCTGC CGCCCGGGAA GCAGGGCGAG CTCTGCGCCC GGGGCTACAT GGTCATGAAG
GGTTACTACA AGATGCCGGA AGAGACCGCC AAGGTCATCG ATGCCGATGG CTGGCTCCAT
ACCGGCGACC TGGCAGTGAT GGACGAGAAC GGCTACTGCA AGATCACCGG TCGCATCAAG
CAGATGATCA TCCGCGGCGG TGAGAATATA TACCCCAAGG AGATCGAGGA GTTTCTCTAC
ACCCACCCGA AGATCTCCGA CGTGCAGATC TACGGCGTGC CGGATCGCAA GTACGGCGAG
CAGGTCATGG CTGCCATCAT CCTGAAAAAC GGGGTGGAGA TGACCGAGGA CGAGGTCAAG
GAGTTCTGCC GGGGGAAAAT TGCCAACTAT AAAATTCCCA AGTACGTGAA GTTTGTGGCT
GGCTATCCCA TGACTGCCAG CGGCAAGATC CAGAAGTTCA AGCTGCGGGA AATGGCCATC
AAGGAACTGG GCCTCGAAGG TGCCGGCGAT GCCGCGTAG
|
|---|
| Protein sequence | MAQHLDFTIG GLLDHMAVTF PDNDALVYPE RGLRYSYRQF NDICRQVAKG LLKLGVRKGD
HVAIWAYNVP EWVILQFATA KIGVVLVTVN TAYKSAELEY LLDQSDSTTL FMVRSWKDTD
YVATLSEVVP ELASAEAGLL TTPKLPFLKR VVFIGEDTPA GMLNFEKIAE MGKEVPDEQL
AAVESSLDVH DVINMQYTSG TTGFPKGVML THYNLVNNGY HIGECMKFTD KDRLCIPVPF
FHCFGSVLAV MASVTHATAM VPVEIFDPLK VLQTVEKERC TAVHGVPTMF IAELEHPDFA
KFDLSTLRTG IMAGSVCPIE VMKRCVKDMN LTELTSVYGQ TESSPGITQT RTEDSVELRV
STVGRALPGA EVKTVDIETG ATLPPGKQGE LCARGYMVMK GYYKMPEETA KVIDADGWLH
TGDLAVMDEN GYCKITGRIK QMIIRGGENI YPKEIEEFLY THPKISDVQI YGVPDRKYGE
QVMAAIILKN GVEMTEDEVK EFCRGKIANY KIPKYVKFVA GYPMTASGKI QKFKLREMAI
KELGLEGAGD AA
|
|---|
| |