| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2671 |
|---|
| Symbol | |
|---|
| ID | 3740191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 3019102 |
|---|
| End bp | 3019863 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637779956 |
|---|
| Product | Phage SPO1 DNA polymerase-related protein |
|---|
| Protein accession | YP_385614 |
|---|
| Protein GI | 78223867 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1573] Uracil-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 66 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 0.663672 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGTTG ACGGGGAGAC GATCGCTTCC CTCAGGCGCT ACCTGGAGGA GCTGAAGGAG
ACCGGCGTGG ACGAGATTCC CCGGGCCGCG GCGTCGCGGG AAGAGCAACC GGTTCCGCCG
CCGGAGGCTG TCGCTCCCGC TTCAGTTCCT GCTTCGTCAG CGCCCGTTGC CGAGCCGCAA
GCGGCGACCG CCGGCGAGAC CCTGGACGAT ATCCGCCGCG ATCTCGGGGA GTGCGTCCGC
TGCCAGTTGG GAAAACAGCG CACGAACCTC GTCTTCGGGG TCGGCAATCC CCGGGCCCGT
CTCGTCTTCA TCGGCGAGGC CCCGGGCAGG GACGAGGACC TCAAGGGGGA GCCCTTCGTG
GGGGAGGCGG GGCAGCTCCT CACGAAGATC ATCCAGGCAA TGGGGTTTGC GCGGGACGAG
GTCTACATCT GCAACGTGCT CAAGTGCCGC CCGCCGGGGA ACCGTAACCC CCACCACGAC
GAGATCGTCC AGTGCGCCCC CTTCATGCTC CGGCAGGTGC GGGCCATCGG TCCCGAGGCC
GTGGTGGCGC TGGGTACCTT TGCGGCCCAG ACCCTCCTGG CCACCAAGGA GCCGATCTCC
GCCCTCCGGG GGCGGTTCCA CGACTACCAC GGCATTCCCC TCATGCCCAC GTTCCATCCG
GCGTTCCTCG TGCGCTACCC CGAACGCAAG CGGGAGGTGT GGGATGACAT GAAGCAGGTC
ATGGCGCTCT TGGGGAAGAA AATGCCGACC AAGAAGGGAT AG
|
|---|
| Protein sequence | MGVDGETIAS LRRYLEELKE TGVDEIPRAA ASREEQPVPP PEAVAPASVP ASSAPVAEPQ
AATAGETLDD IRRDLGECVR CQLGKQRTNL VFGVGNPRAR LVFIGEAPGR DEDLKGEPFV
GEAGQLLTKI IQAMGFARDE VYICNVLKCR PPGNRNPHHD EIVQCAPFML RQVRAIGPEA
VVALGTFAAQ TLLATKEPIS ALRGRFHDYH GIPLMPTFHP AFLVRYPERK REVWDDMKQV
MALLGKKMPT KKG
|
|---|
| |