| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2629 |
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| Symbol | |
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| ID | 3740265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2974275 |
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| End bp | 2976740 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637779915 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_385573 |
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| Protein GI | 78223826 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000585262 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAGG CTCTGCTGGG GATTCTTGAT TTTGTTGCCC GCTTCACCGG CGGGCACGGC
GGCATTGATG ACGAAGTGGC AGTGTATTTC GTCCTTGCAG GGGCGATGTG GCTGAACCTT
CTCTTTTTCG CGTTATGGAG AAGGCGCAAT GAAGCCAATT CCCGGGAGGC ACTGCTCGTC
CTGGGGTTCA GTGCCGGCCT GGCGCGGGAG CTCTTCATGC TCGCCATGGC CATAGGCCAG
AAAGCGCTGA TGGTCGATCC CCGTCACCTG CACGCGTTCT TCCCGCCGGT CGAGCATGTG
CTTTCGGGGG TGGCGACCGT TATTGTTGCC GCCGCGTTCA TGCGTTACCT CACCGGTGAT
TTCTTCCTTG CCCGCAACTA TCTCGGCATA GGCATCACCC TCACCCTTTC CTGCTATATC
GCCACATTCT CGTGGTGGGC CGACTACATA ACCACCAATC CGGCATCCAA ATTCGGCCAG
ACCTGGTGCG ACGTCCTTTT CCACACGATT GCGGCGTTGC TTCTCGTTTT CCCCACCTGG
CACCTCTTCC GCCACCGTAC CGGCTGGCTT CGAAACATCA TCTGCTTCGC CCTCGTCTGT
TTTTTTCTCA CGGAAACGCT CAAACTGGTC GATATAGCCT ACGGAGAGCG GTACGAGTAC
ATCTTTACCC CCATCCGCCG CAGCTTTAAC CTCATCGGCA TCTATGTGCT GGGCTACGTT
TACATCCGCG AACAGGAGTC GAGGCGGAGG CGGGCTACTG CGAAGGTCGT GGAGAGTGAA
AAGCGGTACC GGACCCTTGT TGAGAACGTC AACATGGGCA TCTCCCTCAT TGACGGCAAC
AACCGCATCG TCATGAACAA CGGCTATCTG GAGAAGATGT TCCGGAAGAA TGCCGAGAAA
CTGACCGGAC GGTTCTGCTA CCAGGAATTC GAGAATCGGG ACGAATGTTG CGATAACTGC
CTCGGTGTTG AAGCAATGAC CACGGGAAGA GCCGTATCGA GGGAAGTTGA GAGAATATTG
GATGATGGCG AGCCGTCCGG ACTGCGTCTG AGTGCTTTCC CCGTCTTCAA TGAACAGGGA
AAGGCGACGA AATTCATCAA GGTGGTGGAG GACATAACCG ACCGCAAGCG CGCAGAGGAG
AAAATCAGGC GCCTTGCCTA TTACGATTCC CTGACCGGGC TACCCAACCG GCCCCTCATG
ATGGACCGCC TGTCCCAGGC GATCAGGCAT GCCCGAAGGC ACGGAGAGGT GGTGGCGCTC
CTCTTTCTCG ACCTGGACCG CTTCAAGGAC GTCAACGACA GCCAGGGGCA CCGGGTAGGC
GATCGGCTCC TGCAGGAGGT TGCGGCACGG CTATCGGGCT GTACCCGCGA AAGCGACACC
CTGGCGCGTC TCGGCGGTGA CGAATTCGTC ATCATCGCCC CCGGGGTGCG AGCTGCCACC
GATGCCTCGT TGCTGGCGGA CAAAATCCTG GCGGCCCTGG CCGAGCCGTT TACGCTGGAC
CGGCAGACGC TCCACATCGC CACGAGCATC GGCATCGTCC TCTTCCCGTC GGACGGGGGG
AATGGCGAAA TGCTGCTGCA GCGCGCCGAC ATGGCGATGT ATGCCGCCAA GGATCGGGGC
GGGAACTCAT ACCGGTTCTT CTCGGCGGAG ATGAACACCA GGGCAGTTGA GCGCCATGAG
CTTGAGGAGG ACATGCGGCA GGCGCTGACA AATGGCGAGT TTTTCCTCAT GTATCAGCCC
CAGGTGAATA CCGGCACGTG GAAGGTCGTC GGGGTGGAAG CGCTTGTCCG CTGGAATCAC
CCCCGCAAGG GGGTCATTCT CCCCTCGCGG TTCATTCCGG TTGCGGAGGA GACGGGATTC
ATCTCAAAGT TGGGGAGATG GGTTCTTGAG GAGGCATGCC GCCAGGGAGC GCAATGGCAG
CATGACGGCC TGCCGCCGCT GCAGATGGGG GTAAACCTCT GCGCGCGGCA ATTCACCCAT
GAGGAGATCG TCGGCACGGT CAGCGACGTG CTCCAAAAGA CGGGGCTGCC GTCAGAGCTG
CTGGAGATCG AGCTGACGGA AACGATGCTG ATGGATTCGG AAACGGCGGT CTCCACGCTT
GGGCAGCTCA AGGCGCTGGG AGTACGCCTG GCGATCGACG ACTTCGGCAC GGGATATTCT
TCGTTTAACT ACCTGAAGCA CTTTCCCCTC GACCGGATCA AAATCGACCA GTCCTTTATC
CGCGACATCG GCCAGAGCCG CGGCAACGGG GCCATCATCG AGGCTATCGT TGCCGTGGCG
CGCAGCCTCG GCCCTGAAGT GCTGGCTGAA GGGGTCGAAA CCGAAGAGCA GCTCCGCTAC
CTGATGTCGA TAACCTGTGC CGACATCCAG GGGTTCTATT TCTCCCGTCC CCTCCTGCCA
GACGACGTTT CCCGCCTCAT CCGCGAATCA CTTCCCGGTT TCGGGACGCA CCACTTTACC
AACTGA
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| Protein sequence | MQEALLGILD FVARFTGGHG GIDDEVAVYF VLAGAMWLNL LFFALWRRRN EANSREALLV
LGFSAGLARE LFMLAMAIGQ KALMVDPRHL HAFFPPVEHV LSGVATVIVA AAFMRYLTGD
FFLARNYLGI GITLTLSCYI ATFSWWADYI TTNPASKFGQ TWCDVLFHTI AALLLVFPTW
HLFRHRTGWL RNIICFALVC FFLTETLKLV DIAYGERYEY IFTPIRRSFN LIGIYVLGYV
YIREQESRRR RATAKVVESE KRYRTLVENV NMGISLIDGN NRIVMNNGYL EKMFRKNAEK
LTGRFCYQEF ENRDECCDNC LGVEAMTTGR AVSREVERIL DDGEPSGLRL SAFPVFNEQG
KATKFIKVVE DITDRKRAEE KIRRLAYYDS LTGLPNRPLM MDRLSQAIRH ARRHGEVVAL
LFLDLDRFKD VNDSQGHRVG DRLLQEVAAR LSGCTRESDT LARLGGDEFV IIAPGVRAAT
DASLLADKIL AALAEPFTLD RQTLHIATSI GIVLFPSDGG NGEMLLQRAD MAMYAAKDRG
GNSYRFFSAE MNTRAVERHE LEEDMRQALT NGEFFLMYQP QVNTGTWKVV GVEALVRWNH
PRKGVILPSR FIPVAEETGF ISKLGRWVLE EACRQGAQWQ HDGLPPLQMG VNLCARQFTH
EEIVGTVSDV LQKTGLPSEL LEIELTETML MDSETAVSTL GQLKALGVRL AIDDFGTGYS
SFNYLKHFPL DRIKIDQSFI RDIGQSRGNG AIIEAIVAVA RSLGPEVLAE GVETEEQLRY
LMSITCADIQ GFYFSRPLLP DDVSRLIRES LPGFGTHHFT N
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