| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2597 |
|---|
| Symbol | |
|---|
| ID | 3739982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2946438 |
|---|
| End bp | 2947958 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637779883 |
|---|
| Product | NADH-ubiquinone oxidoreductase, chain 49kDa |
|---|
| Protein accession | YP_385541 |
|---|
| Protein GI | 78223794 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3261] Ni,Fe-hydrogenase III large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGATT CATTCCGCAC CATATACAAC GGGGCCTCCG TCCCCCTGGC AGAGATTCCC
CCCGTAGATA TCAACGAGTT TTTGCAGGGG ATTCTCGATT CCGTAGACCG GGGATGGCGG
ATTGTTTCGT ATTTTGGCAT TCCGGCGCCA TCCTCCACCG CGCTCGTATG CATCCTGGCC
AACAAGGCCG AGGGGCGGCT TGCCGCGGCC CGTACGGAAA CAAGCGACAG TCACGTCCCC
TCCCTTTCCT CGCTCATTAC CCAGGTGCAA CTGTTTGAAC GCGAGATCGC CGAGCAGTGC
GGTCTGATAT TCGATGGACA CCCCTGGTTC AAGCCGGTTC GTTTCCACCA TTCGTTCGTG
CCGGGACGCG ATGCCTGGGA CCGCACCGCG GACGAGCCGC TCCGCGTTGG CGTCATGGAC
TATTACCAGG TGGCGGGCGA CGAGGTGCAC GAGGTTGCCG TCGGCCCCGT CCATGCCGGC
ATCATCGAGC CGGGACACTT CCGCTTCCAG TGCCACGGTG AGGAGGTCTT CCACCTGGAA
ATATCCCTCG GCTACCAGCA CCGGGGGATC GAGGCGGGTC TTGCGGGCGG ACCTCACCCG
CGCACCTTGC AGGTAATGGA AACAGCCGCC GGCGACACGA CCATCGGCCA TGGCCAGGCC
TACTGCATGA TCATGGAGTC GTTGGGAGGG ATCAAGGCTC CTCCCCGGGC GGAAGTGTTG
CGTGGCATTG CCCTCGAACT GGAGCGGCTG GCCAACCATA CCGGCGACCT GGGGGCAATC
GCCGGCGATG TGGGGTATCT GCCGACCTCA TCCTTCTGCG GCCGTATCAG GGGAGATTTC
CTCAACATGA CCGCTGTCCT CTGCGGCAGC CGTTTCGGTC GGGGGCTTCT CGTCCCGGGC
GGAACGATTT TCGATCTGAC GCCAGGGTTG CGCGACGATC TTCTGAAACG TCTGGCAGAG
GCGCGACGTG ACCTGACCAA TGCCATTGAG CTGCTCTGGA GCTCCCCGTC GGTGATGGGA
CGTTTGGAAG GTACCGGCAC ATTGACCCGT GAACAGGCCC TCGAACTCGG CCTGGTCGGG
CCTGCCGCAC GGGCCTGCGG GATCAAGCGG GATGTTCGTC TCGATTATCC GTTCGGCATC
TATCGCATGA CCCACCTTCC GGTTGCGACC GTTTTCCATG GTGACGTGTG CGCACGCACC
ATGATCAGAT GGCTGGAAGC CCAGAAATCA ATGGATTTTA TCGAAGAACA GCTGCGGCAG
CTCCCCGGAG GCGGGCATCG GGTCGCTACG GCCCCCTGCG CCGGCGGGCG TCTGGCCGTT
GCCCTGACCG AGGGGTGGCG CGGGGAAATA TGTCACGTGG CGGTCACCGA CGATGCCGGG
CGTTTCAGCC GGTACAAGAT CGTCGACCCT TCGTTTCATA ACTGGCAAGG GCTCGCCTTG
GCGCTTCGGG GACAGCAAAT ATCCGATTTT CCGCTCTGCA ACAAGAGCTT CAACCTGTCC
TATTGCGGGT TCGACCTCTA G
|
|---|
| Protein sequence | MKDSFRTIYN GASVPLAEIP PVDINEFLQG ILDSVDRGWR IVSYFGIPAP SSTALVCILA
NKAEGRLAAA RTETSDSHVP SLSSLITQVQ LFEREIAEQC GLIFDGHPWF KPVRFHHSFV
PGRDAWDRTA DEPLRVGVMD YYQVAGDEVH EVAVGPVHAG IIEPGHFRFQ CHGEEVFHLE
ISLGYQHRGI EAGLAGGPHP RTLQVMETAA GDTTIGHGQA YCMIMESLGG IKAPPRAEVL
RGIALELERL ANHTGDLGAI AGDVGYLPTS SFCGRIRGDF LNMTAVLCGS RFGRGLLVPG
GTIFDLTPGL RDDLLKRLAE ARRDLTNAIE LLWSSPSVMG RLEGTGTLTR EQALELGLVG
PAARACGIKR DVRLDYPFGI YRMTHLPVAT VFHGDVCART MIRWLEAQKS MDFIEEQLRQ
LPGGGHRVAT APCAGGRLAV ALTEGWRGEI CHVAVTDDAG RFSRYKIVDP SFHNWQGLAL
ALRGQQISDF PLCNKSFNLS YCGFDL
|
|---|
| |