| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2556 |
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| Symbol | |
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| ID | 3738860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2901389 |
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| End bp | 2902888 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637779842 |
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| Product | peptidoglycan-binding LysM:lytic transglycosylase, catalytic |
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| Protein accession | YP_385500 |
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| Protein GI | 78223753 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000626959 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0000000459399 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAG CTCTTCTCCT CCTCGTTCTA TGTCTCTTTC CGGTTCTTCC CGCCCTGGCA
TCGGAACCCC GTAACTCACC CCTCAAGGAA CTGGCCGCGC TGGGTAATTC CTCCTCGCTT
CCCGACCTTT CGGGAGCCGT TCCCTCCGGG TTCGACTCTC GCCCCGGCCG CAGGTCCGGT
TCCCTTGAGC CCTCCATGGG AGACCTGGTC GTCATCGAAG ACCAGGGAGC CGCCGAAAAC
GACTTTGAAC TGAAGATTCC CGAGGGTCCG CTCCCCGACT CGGATATTCC GCTTACCCTC
AACGGCCAGG TGGAGTACTT CATCCGCTAC TTCCAGTCAT CCGGCCGCAA GTCTTTTACC
CGCTGGCTTT CCCGCTCCGA ACGCTATATT CCGATGATGA AGGAAGTCCT CAAGAAAAAC
GGCCTTCCCG AGGATCTGGT CTACCTCGCC ATGATCGAGA GCGGCTTCAC CCCCCACGCG
GTGTCGGTGG CTAGCGCCGT GGGGCCGTGG CAGTTCATCT CCGGCACCGG GAAACGCTAT
GATCTGCGGA TAGACCAGTG GATCGACGAG CGGCGGGATC CCCTCAAGTC GACGGTGGCG
GCGGCCCTGT ACCTGAAAGA GCTCTACGCC ATGTTCAACA ACGACTGGTA CCTGGCGGCA
GCAGGGTACA ACGCGGGGGA GAACAAAATC CTGCGGGCCA TTGATCGGTA CAATACCCGC
GACTTCTGGG AGATCTCCAA GGGTTCATAT CTGAAGCGGG AAACCAAGGA GTACGTGCCG
AAACTCCTGG CCGCCGCCAT TATCGCCAAG GAACCGGCCC GTTATGGCTT TGCCGACGTT
GCCTACCTTC CTCCCATCGA GTTCGACACG GTGACGATTC CCTCCCGCAC CGATCTGGAG
GTGGCGGCGA AGCTCTGCAA TGTGGACTAT CAGGTCGTCA AGGAGCTGAA TCCTGAACTG
CGCCGCTGGT GCACTCCCCC GGACTACCCC GGCTACGAGC TTAAGATTCC CGTTGGCAAG
AAGAGGGCCT TTGAGCAGGC CTATGCGCAA CTTCCCGAAG GTCAGCGCTA CGCCGAGCGG
GTTGTTTACA CCCGCTACCG GGCCAAGAAA AGGGATACCC TCGCGTCAAT CGCCAGCCGT
TACGGCACCA CCCCCCAGGC CCTGGCCGAG GTGAACAAGC TGAAGCTCTC CGCCAAGGTG
CGGGGGCGGA CCCTCCTTGT GCCGGTGGTT GCCGACAGGG AGCCGGCGGT CCAGACCGCG
AAGGCCGATG TTTCGCGCAA GGAGAGCGCC AAGGGGTTCA ACAAGTACTA CACCGTGAAA
AAGGGCGACA CGATTGCGTC GCTTTCAAAG AAATTCAATA TCTCGTCCCG CATTCTCACC
GCCTGGAACA GCCTGAAGGG AAAACTTGCC CTTCGTCCCG GCAAGCGGAT CATCGTTGCC
AAGTACGTGG AGAAGAAGGG TTCCATGGTT CCGGTGTCCG GCGGCGACGA CAACGGATAA
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| Protein sequence | MKKALLLLVL CLFPVLPALA SEPRNSPLKE LAALGNSSSL PDLSGAVPSG FDSRPGRRSG
SLEPSMGDLV VIEDQGAAEN DFELKIPEGP LPDSDIPLTL NGQVEYFIRY FQSSGRKSFT
RWLSRSERYI PMMKEVLKKN GLPEDLVYLA MIESGFTPHA VSVASAVGPW QFISGTGKRY
DLRIDQWIDE RRDPLKSTVA AALYLKELYA MFNNDWYLAA AGYNAGENKI LRAIDRYNTR
DFWEISKGSY LKRETKEYVP KLLAAAIIAK EPARYGFADV AYLPPIEFDT VTIPSRTDLE
VAAKLCNVDY QVVKELNPEL RRWCTPPDYP GYELKIPVGK KRAFEQAYAQ LPEGQRYAER
VVYTRYRAKK RDTLASIASR YGTTPQALAE VNKLKLSAKV RGRTLLVPVV ADREPAVQTA
KADVSRKESA KGFNKYYTVK KGDTIASLSK KFNISSRILT AWNSLKGKLA LRPGKRIIVA
KYVEKKGSMV PVSGGDDNG
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