| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2478 |
|---|
| Symbol | |
|---|
| ID | 3740154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2818594 |
|---|
| End bp | 2820795 |
|---|
| Gene Length | 2202 bp |
|---|
| Protein Length | 733 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637779770 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_385428 |
|---|
| Protein GI | 78223681 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.513858 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 80 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGG ATATGAAACT CGGCGTACGG CTTATCGGAT CCTTCATCAT TATGGCCGTC
ATCGTGGCGG TGACCGGATT GATCGGCATC CGGAGCATCA ACATGGTTTC AAGCCGTGTC
GGGACCGTCC TGCAGGAACA GTACGATCAG CAGAAGGTGG CGCTCCAGCT CCAGTCGGCC
GAGCGGACCG TCCGGGCGGA CCTCCTTGAG GGACTGATGG GGCACCTTGA CGAAAAGGGA
ATGAAGGAGC ACCTCGACTC ATATACCAAG AACCGCGATC TCATCCGCCG TTACTCAACG
GGACTTCTCA AGGGGGACGA GGCGCTGGGG ATTCACCCGG CGCCCAAGGA CAGCGTCATG
GAATCCCACG CCGAGACCCT CACGGAAACA TGGGGCGAAT ACGAAAAGGT TGCCGAGAAG
ATCATCGCTT ACAAAACCGC TGTTATTGCC GGCCAACAGA CTCCGTCCAC GCTGTCCGAG
TCCCGCCTCA TCTCGGAGCT TTCCGGTGCC AGCGAGTTCG TTGCCCGTGA TATCGACGAT
CTCATCGAAA CGGTCAAGGG GATGATGAAG GATGCGGGGA AGGAGACGTC GCGGGTCAAA
ACCTCCGTAA CCATAACCTT CATTTTCGTG ATTATCGGTG CCGCGGCCCT CGCCTTTTCG
TTCGGCATTG TTGCTACCCG CAACATTATT CGCCGCGTCG ATCAGATGGT CAAGGCCGTG
AAGGGCGGCG CGGAGGGGGA TCTCTCCTCC CGGGTGCCCA TCACGTCGGG AGATGAACTC
GGCCGACTCG GCGATGACTT CAATACCATG CTGGAGAAGC TCGGTGAACT CGTTAAGAAG
GTGAATCGCT CCCTGGTGGA GGTGGGGCAG ATCTCGGCCA ACATCTTCGA GGTCTCCCGC
CGGGTCCTCT CCGCGGCCGA GGTTCAGGCC GAGGGGGGGT CCCAGACATC CTCCGCGGTG
ACCGAGATCA ATGCTTCCAT CAAGGAAGTT TCCTCCGGGG TCGACAGTCT TTCGCTCTCG
TCGTCGGAGA CCTCGTCCTC CATCCTGGAG ATGGCCGCGA GCATCGAAGA GGTGGCCTTG
AACGCGGAGG CCCTGGCCCA GTCCGTTGAG GAGGTGAGCT CTTCGGTCGT GGAGATGGTG
GCGTCCATCA AGCAGATCAG CGGCAGTGTC GCGAGCCTCA TGGAGGCGAC CTCATCCACT
GCTTCTTCGG TGGCCGAGAT GGACAGCTCC ATCAAGCAGG TCGAGAAAAA CGCCATGGAA
TCCGCGGCCA TTTCCGAGGG AGTCCGCCGT GACGCCGAAA CGGGCAAGGC TTCGGTTGAG
GCCACCATTG CGGGCATCAG CGAGATCAAG CGCTCGTCCC GGATTACCTC CGAGGTGATC
GAAACCCTTT CGGAGCGGGT CAGCGATATC GGCGCGATCC TCTCGGTCAT CGACGAAGTG
GCCGAGCAGA CCAACCTCCT GGCGTTGAAC GCCGCCATCA TCGCCGCCCA GGCAGGGGAG
CACGGCAAGG GGTTCGCCGT GGTGGCCGAC GAGATCAAGG AGTTGGCCGA ACGGACCTCC
AGTTCCACCC GGGAAATCTC CCTGCTCATC AAGGGGGTTC AGGACGAAAC CGCCCGGGCC
GTGGAGGCGA TCGAGGTGGC CGAGAAGAGC ATCGCCGACG GAGAGATTCT GTCACAGCGG
TCGGGCGAGG CCCTCGCCAA GATCGTTACC GGGGTCCAGG AGACCACCGC ACAGGTGGAA
AGCATCGCCC GGGCCACCAT GGAGCAGGCC AAGGGGAGCC AGATGATCCG GGAGGCCATG
GAGCAGGTCT CCGACATGAT CGGCCAGATC GCCAGCGCCA CCCGTGAGCA GAGCAAGGGG
AGCGACATGA TTATGGGGGC TGCCGAGCGG ATGAAGGGGC TCACCTCCCA GGTAAGGGTC
TCCACCAAGG AGCAGGCAAA AGTCGGGAAT TTCATTGCCA GTTCCACGGA GAATATCACC
ACCATGATCC GCCAGATCAA GAGGGCCTGT GACGAGCAGA CCCGGGGGAG CGAGCAGATT
ATCCGCGCCG TAGAAAACAT CCAGGAATCA ACGGATACAA ACCTTGGGGC CGCCAAGATG
ATGGAGGACT CGGTCTCCCG GCTCTCCCGC CAGCTTGAAG TGCTTCAGGG AGAAATGAAC
AGCTTCAAGG TTGAAAATCA GGGAGCAGTG CCCAAGGGTT AG
|
|---|
| Protein sequence | MLKDMKLGVR LIGSFIIMAV IVAVTGLIGI RSINMVSSRV GTVLQEQYDQ QKVALQLQSA
ERTVRADLLE GLMGHLDEKG MKEHLDSYTK NRDLIRRYST GLLKGDEALG IHPAPKDSVM
ESHAETLTET WGEYEKVAEK IIAYKTAVIA GQQTPSTLSE SRLISELSGA SEFVARDIDD
LIETVKGMMK DAGKETSRVK TSVTITFIFV IIGAAALAFS FGIVATRNII RRVDQMVKAV
KGGAEGDLSS RVPITSGDEL GRLGDDFNTM LEKLGELVKK VNRSLVEVGQ ISANIFEVSR
RVLSAAEVQA EGGSQTSSAV TEINASIKEV SSGVDSLSLS SSETSSSILE MAASIEEVAL
NAEALAQSVE EVSSSVVEMV ASIKQISGSV ASLMEATSST ASSVAEMDSS IKQVEKNAME
SAAISEGVRR DAETGKASVE ATIAGISEIK RSSRITSEVI ETLSERVSDI GAILSVIDEV
AEQTNLLALN AAIIAAQAGE HGKGFAVVAD EIKELAERTS SSTREISLLI KGVQDETARA
VEAIEVAEKS IADGEILSQR SGEALAKIVT GVQETTAQVE SIARATMEQA KGSQMIREAM
EQVSDMIGQI ASATREQSKG SDMIMGAAER MKGLTSQVRV STKEQAKVGN FIASSTENIT
TMIRQIKRAC DEQTRGSEQI IRAVENIQES TDTNLGAAKM MEDSVSRLSR QLEVLQGEMN
SFKVENQGAV PKG
|
|---|
| |