Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2455 |
Symbol | |
ID | 3740339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2778262 |
End bp | 2779230 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637779747 |
Product | polyprenyl synthetase |
Protein accession | YP_385405 |
Protein GI | 78223658 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000000180398 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTCTG CTCTTGCCCT GGTCGGTGAT GACCTGAAAA ACGTCGAAGC ACAGTTCAAG AAGGACCTCG AGTCGGATGT CTACCTGATC CGCAAAGTGG GGGAATACGT TCTCGCCAGC GGGGGAAAAC GGATCCGGCC GACGCTCCTG CTCCTCGCCG CCAAGCTGTG CGGCTACACC GGCGACCGGC ATGTGCCCCT GGCGAGCGTC ATCGAATTCA TCCATACCGC CACGCTTCTC CACGACGACG TGGTGGACAA CGCGACCCTG CGCCGCGGCA ACGCCTCGGC CAACGAGGTG TGGGGCAACG AGGCATCGGT CCTCGTGGGC GATTTCCTCT TCTCCAAGTC GTTCTCTCTC ATGGTTCAGG CCGGTGACCT GCGGGTTCTC AAGGTCATAT CCGATGCCAC CACCATCATT GCCGAGGGTG AGGTCCTCCA GCTCCTCTGC ACGAGCGATC TGGATATGAC GCTGGAGCGG TACATTGAAG TGGTGAAGAG CAAGACCGCC GTCCTCCTCT CCGCTGCCTG CGAGGCGGGA GCCATCCTCG GGAAGGCCAC GCCGGAGCAG GAACTGGCCC TGCGGGACTT CGGCATGGAT CTGGGGATTG CCTTCCAGCT CATGGACGAC ACCCTCGACT ACACGGCCAG CGAGGAGCAG TTCGGCAAGG AGATCGGCCA TGACCTGGAA GAGGGGAAGA TCACCCTCCC GCTCATCCAC ACCCTCCGCA AGTGCACCGA CGAGGAGCGC GAAACCATCG CCGCCGTCGT GGAGAAGGAG GTCATGGAGC CGGGTGACTT CGAGGCGGTA TTCGCCCTGG TCCACAAGTA TGGCGGCATC CAGTACACCA CCGAGGTGGC AGGCGAGTAC ATTGCCCGCT GCAAGGAGCA CCTCCAGGCG TTCCCCGCCT CCACGGAGAA GCAGGCCGCG CTCGATCTGG CCGACTACGT GGTGAGCCGC AACCGTTAA
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Protein sequence | MHSALALVGD DLKNVEAQFK KDLESDVYLI RKVGEYVLAS GGKRIRPTLL LLAAKLCGYT GDRHVPLASV IEFIHTATLL HDDVVDNATL RRGNASANEV WGNEASVLVG DFLFSKSFSL MVQAGDLRVL KVISDATTII AEGEVLQLLC TSDLDMTLER YIEVVKSKTA VLLSAACEAG AILGKATPEQ ELALRDFGMD LGIAFQLMDD TLDYTASEEQ FGKEIGHDLE EGKITLPLIH TLRKCTDEER ETIAAVVEKE VMEPGDFEAV FALVHKYGGI QYTTEVAGEY IARCKEHLQA FPASTEKQAA LDLADYVVSR NR
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