| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2454 |
|---|
| Symbol | |
|---|
| ID | 3740338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2777032 |
|---|
| End bp | 2778135 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637779746 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_385404 |
|---|
| Protein GI | 78223657 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0000691569 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGA CAGGTCCCCT CCGCATCCTG TTTCTTGCCG CAGCAATCAT CGGGATCAGC
CTCTTTCATT ATCTGACTCC GCTCCATCTT CCTGCGCTCC ACGACATCTT CCAGCGGCTC
TACTACCTGC CGATCATTCT GGCCGCCCTC TGGTTCGGTC TGAGGGGGGG GCTCGCCGCT
TCCATCATCG TCAGCATCCT TTACGTTCCC CATGTCCTCT TTCAGTGGGG CGTGCATCCG
TCGCTGGAGC TGGAGAAATT CCTGGAGATT CTCCTCTACA ACGTGGTGGG GGGAGTTACC
GGATTCCTCT GCCAGAAGGA GGGGGAGCGC CGCGAGGAAC TGGAACGCGC GGCCCGGCGC
CTCGAAGAAT CGTACCGCGC GCTCCGGAGC CAGGCAGACC TCATTATCGG CATCGAGGAA
CAACTGCGCC GGGCCGAGCG GCTGTCGGCC CTTGGAGAGC TTTCGGCCAT GCTGGCCCAT
GAGATCCGCA ATCCCCTCGG CTCTATCCGG GGGACGGCGG AAATCCTTCG GGACGACTTC
CAGCCGGGGC ATCCGAAGCA CGAGTTCCTG GAGATTCTCC TCAAGGAGAC CGATCGCCTG
AACCGGGTGG TCGAGGATTT TCTCCGGCTG TCACGTCCTG GTGACGGGGA GAGAAAGACC
TGCGACCTGG CTGCCGAGCT GCGGGAGTTG GTGACTCTTC TCGGCAGCGA TGCCGCGGCC
CGAGGGGTGC GAATTGGCCT TGAGGCTGAC GAGGTGCCGC CGGTCACCGG CGACCCGGAG
AAACTGCGGC AGGCTTTTCT CAATTTGATG CTGAACGGCA TCCAGGCCAC CGGTGCGGGG
GGGACTGTTA CGGTGAGGGT GAAGATGTTC CCGCGTAGCG GCGACGACCG CCCCCTTGTG
GAGCTGGCGT TTGCCGACAC CGGTGCGGGA ATCCCGCGGG AGAGCCTCGA AAGGATATTC
ACGCCGTTTT TCACCACGAA GGAGGGGGGG ACGGGACTCG GTCTCGCCAT CACCCAACGG
ATCGTGGAGG GACACGGCGG GACCGTGACG GTGGAGAGCG AGCCGGGGCA GGGGACAACG
TTCCGGGTGC GGCTTCCCCT GTAA
|
|---|
| Protein sequence | MTLTGPLRIL FLAAAIIGIS LFHYLTPLHL PALHDIFQRL YYLPIILAAL WFGLRGGLAA
SIIVSILYVP HVLFQWGVHP SLELEKFLEI LLYNVVGGVT GFLCQKEGER REELERAARR
LEESYRALRS QADLIIGIEE QLRRAERLSA LGELSAMLAH EIRNPLGSIR GTAEILRDDF
QPGHPKHEFL EILLKETDRL NRVVEDFLRL SRPGDGERKT CDLAAELREL VTLLGSDAAA
RGVRIGLEAD EVPPVTGDPE KLRQAFLNLM LNGIQATGAG GTVTVRVKMF PRSGDDRPLV
ELAFADTGAG IPRESLERIF TPFFTTKEGG TGLGLAITQR IVEGHGGTVT VESEPGQGTT
FRVRLPL
|
|---|
| |