Gene Gmet_2425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2425 
Symbol 
ID3738440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2743282 
End bp2744343 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content60% 
IMG OID637779717 
Productdiguanylate cyclase 
Protein accessionYP_385375 
Protein GI78223628 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAAT CGCACATTAT GGCGGGAAAC TGCACGGTAA AACCGGCACG GATGACACGC 
GCCCCCTATG CACGGCACGA ACTGAAATCG ACAAACTCCG GTTGTGACGA ATCTCCTGCC
GCCCTGGAGC GGCGCGTTGC CGAACTGCTT CTCGTGGCGG ATTTTGGCGC TGTTGTCGGT
TCCATCCTCG ACCCCCGGCA GGTATGCGAG GTAGCATCTT CATGGCTCGG CGAGACTCTC
GGCTGGCAAA TGCTCTCGGT TTGCTGCCAT GATTTTTCCA CCGGCACGAT GAGGGGTGGG
GCGGGACGCG GTCGTCATTT GTCAAAAAAA CGTCAGGAAG GCGCCACGTC CACGGTCTTT
ATCGCTGCCG CGCAGAAGGG GCTGAGCGAT GCCGCCGACG TCCGTACCAT CCCTTTCCCC
GACGGCTCGG GAACCCTCTC CCTCTCCCGT CAATCCCTGG CCGAAAGTCA ATATTCCGAC
GAGTTCTTTG GGGGAGTTGT CGAAAACCTT GCCCGTTCCC TGGCCGCTGC CCGGGAGTGC
GACCGGCTCA AGAACCTTTC CATGCGCGAT CATCTGACCG GACTTTACAA CCGTCGGGTC
TTCGAGGCGA TGCTGGAAGT CGAGGCCCGG AAGCGGACCA CAAAGCCGTT TTCGCTGCTT
TTGATCGATC TCGACGACTT CAAACGCGTG AACGATACCT ACGGTCACGG AGCCGGAGAC
CAGGTTCTCG TCGCCGTGGC GAAGATGCTG AGGCTCAGCT TCCGGAAGTC CGACGTCGTT
TCCCGCTACG GCGGCGAGGA GTTCGGAGTG CTGCTCCCCG ATACGTCGCA GGATTCCGCC
CGGGTGGTTG CGGAACGATT CCGGCAGAAT GTGGCGACGC TGTCGCTTCC CGTGAACAAA
GAGAAGATAA TGCCGACGGT CAGTGTCGGA ATCGCCTCCG TGACGCTGCG CCTGGGAATT
GAGGTTGCCG ATGTGATCGA AGAGGCCGAC CGGGCTCTCT ACCAGGCGAA GGTGACCGGC
AAGAACCGCG TCTGCTCTTC CCTGCTGGGA GAGAATTCGT AA
 
Protein sequence
MLQSHIMAGN CTVKPARMTR APYARHELKS TNSGCDESPA ALERRVAELL LVADFGAVVG 
SILDPRQVCE VASSWLGETL GWQMLSVCCH DFSTGTMRGG AGRGRHLSKK RQEGATSTVF
IAAAQKGLSD AADVRTIPFP DGSGTLSLSR QSLAESQYSD EFFGGVVENL ARSLAAAREC
DRLKNLSMRD HLTGLYNRRV FEAMLEVEAR KRTTKPFSLL LIDLDDFKRV NDTYGHGAGD
QVLVAVAKML RLSFRKSDVV SRYGGEEFGV LLPDTSQDSA RVVAERFRQN VATLSLPVNK
EKIMPTVSVG IASVTLRLGI EVADVIEEAD RALYQAKVTG KNRVCSSLLG ENS