Gene Gmet_2405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2405 
Symbol 
ID3740443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2719888 
End bp2721051 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content63% 
IMG OID637779697 
Producthypothetical protein 
Protein accessionYP_385355 
Protein GI78223608 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0262818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATCC CTTACTCCTA CAGCTTCCGC AACCTCTGGA CCCGGCGTCT GACCACGGTC 
CTTACCGCCT CAGGCATGGC GCTGGTCGTC TTTGTCTTTG CGGCAACCCT CATGCTGGCC
GAGGGGCTTC GGAAGACCCT GGTGGATACC GGTTCCTACG ACAACGTGGT GGTGATCCGC
AAGTCGGCCC AGACCGAGGT GCAGAGCGGC ATCGACCGTT CCCAGGCCGC GGTGGTGGAA
ACTCAGCCCG AGATCGCGGT GGAGGGGGGA GAGCGTCTTG TCGCGAAGGA AATCGTGGTC
CTCATCAGCC TTCCTAAGCG GGGGAGTGGT AAGCCCTCCA ACGTCATTAT CCGGGGGGTA
AGTGCCACAT CGCTCCTCAT GCGCCCCCAG GTGAAAGTCA TTGAGGGACG GATGCCGCGC
CCCGGCTCGG CCGAGATCAT GGCAGGAGCC AGCATTGCCA AGCGCTTCAA GGGGGGAGGT
ATCGGCGAGA CCCTGCGCTT CGGCATGCGG GACTGGACCG TGGTGGGAAT CTTCGAGGCC
GGCAATACCG GCTTCTCATC GGAGATATGG GGCGACGTGG ACCAGCTCAT GCAGGCCTTC
CGCCGGCCCG TCTACTCCTC CATCATCTTC AAGTTGCGGG ACCCGTCGGA GTTCGTCAGG
GTGAAGGAGC GGATCGAGGG CGACCCGCGC CTGACCCTGG AAGCGAAGCG GGAGATCACC
TTCTACGCCG ATCAGTCCCA GGCCATGGCC AAGTTTCTCC GGATTCTCGG GATAACCCTC
ACCATCATCT TCTCCCTCGG GGCGGTCATC GGCGCCATGA TCACCATGTA CGCCGCCGTG
GCCAACCGGG TCACCGAGAT AGGCACCCTG CGGGCCCTGG GCTTCCAGCG GGGGAGCATT
CTGGCCGCCT TCATCCTGGA GTCGCTCTTC CTGGGGCTCC TGGGCGGGGT GGTGGGGCTT
TTCTTCGCTT CGTTCATGCA ACTGGTCACC ATCTCCACCA TGAACTGGCA GACCTTTTCG
GAGCTGGCTT TCACCTTCTC CCTCACCCCC GGCATCATCG GCAAGTCGCT TATCTTTTCC
CTCGTCATGG GGTTTGTGGG GGGATTGCTG CCGGCCTTCC GGGCGGCGCG GATGAATATC
GTGGATGCGC TGCGGGCGAC GTAG
 
Protein sequence
MGIPYSYSFR NLWTRRLTTV LTASGMALVV FVFAATLMLA EGLRKTLVDT GSYDNVVVIR 
KSAQTEVQSG IDRSQAAVVE TQPEIAVEGG ERLVAKEIVV LISLPKRGSG KPSNVIIRGV
SATSLLMRPQ VKVIEGRMPR PGSAEIMAGA SIAKRFKGGG IGETLRFGMR DWTVVGIFEA
GNTGFSSEIW GDVDQLMQAF RRPVYSSIIF KLRDPSEFVR VKERIEGDPR LTLEAKREIT
FYADQSQAMA KFLRILGITL TIIFSLGAVI GAMITMYAAV ANRVTEIGTL RALGFQRGSI
LAAFILESLF LGLLGGVVGL FFASFMQLVT ISTMNWQTFS ELAFTFSLTP GIIGKSLIFS
LVMGFVGGLL PAFRAARMNI VDALRAT