| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2249 |
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| Symbol | |
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| ID | 3738066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2545606 |
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| End bp | 2546388 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637779541 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_385201 |
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| Protein GI | 78223454 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000000000113674 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 1.89116e-19 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGGAAAAC TTGACGGCAA AGTGGCCATT GTGACTGGTG GTGCCCGTGG TATGGGCCAA
ACGACTGCAG AGGTTTTTGT CCAAGAAGGC GCCAGTGTGG TGATTGTTGA TGTTCTTGAT
GTTGAGGGCG AGGCCTTGGC AAAGAGACTT GGCCGCAACA CAATGTATCA GCATCTTGAT
GTGACTGACG AGCAGGGATG GGAGCAATTG GTGGAAGGCA TTATTGATAG GTATGGCTGC
ATCGACATAC TTGTGAACAA TGCGGCCGTT TTCTTTTCTT CGCCGATTGA TGAAACCCGG
AGCGAAGCTT TTCGTCGGAT TCTTGATATT AACCTGATTG GCCCATATTT GGGGATGAAG
GCAGTTATCC CCACGATGAA AAAGAACCGA CGTGGTTCTA TTATTAATGT TTCGTCTGTG
AACGGGTTGC GCGGATCTTC CGGATCGGGT GCCTATTCGG CAAGTAAGTG GGGAGTGCGT
GGTCTGACCA AGTGTGTTGC CATGGAGGTG GGCCCTTTCG GCATCCGTGT TAACTCTCTA
CATCCTGGGT GGATCGTAAC GCCGATGAAT AACCCGGATG GTAAGTCCTT CGAAGAGGTT
AATGCAGAAC TGAAAATCAA ATTTCCTGGA ATCGCCTTGA GCCGTGTTGG ACAATCAGAG
GAAATTGCTC GCGCCAGTCT TTTTCTGGCA AGCGATGACT CATCATATAT TTCGGGGGCG
GAACTGGCAG TGGACGGTGC TTGGTCCTGT GGGGTCTATT TGCAAGATAA GCCGATGCCT
TGA
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| Protein sequence | MGKLDGKVAI VTGGARGMGQ TTAEVFVQEG ASVVIVDVLD VEGEALAKRL GRNTMYQHLD
VTDEQGWEQL VEGIIDRYGC IDILVNNAAV FFSSPIDETR SEAFRRILDI NLIGPYLGMK
AVIPTMKKNR RGSIINVSSV NGLRGSSGSG AYSASKWGVR GLTKCVAMEV GPFGIRVNSL
HPGWIVTPMN NPDGKSFEEV NAELKIKFPG IALSRVGQSE EIARASLFLA SDDSSYISGA
ELAVDGAWSC GVYLQDKPMP
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