Gene Gmet_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2238 
Symbol 
ID3738192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2530752 
End bp2531606 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content52% 
IMG OID637779530 
ProductAcyl-CoA thioesterase 
Protein accessionYP_385190 
Protein GI78223443 
COG category[I] Lipid transport and metabolism 
COG ID[COG1946] Acyl-CoA thioesterase 
TIGRFAM ID[TIGR00189] acyl-CoA thioesterase II 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.58681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000000000102544 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACAAA TATTGCCAGA GATCCTTGAA CTCGAACAGA TTGAGGAGAA CCTTTACCGG 
GGACTCAGTC AGAATCTTGG CGTTAACCGA ATCTATGGTG GCCAGGTTCT CGGTCAGGCC
TTGGCTGCCG CAGGAAAAAC TGTTATTGGA CGTAAGGCTC ATTCTTTCCA CGCCTATTTT
CTCCTCATGG GTGACAATAA GCTTCCGGTC ATGTATGAGG TGGACCGTAT TCATGAGGGT
CACAGTTTTG CGACCCGCAG AGTGGTGGCC ATCCAGCGTG GGCGTGCGAT CTTTGCCATG
ACGGCATCGT TTCAGATCGA AGAGAAAGGA CTTGAACACC AAGCTTCCAT GCCCGAGGTT
CCTGCCCCCG AAGAACTTCC GACCTTGGTT GAAACCTTGG GAAAGATGGC CGCTCCCAAC
AGGCGCCTGC AGAACTTTTT TAATAATTTC CCTATTGAAA TACGTCCCGT TAAACCCGTT
AATCCCTATG CATCTGGCAT GTATCTTCCT TTTTCAAGTG TATGGCTTCG ATCTACAGAC
CGGCTTTCCG ACTGTGTCGG GTTCCACCAA GCCGCCTTGG CCTACGCTTC TGACTATGGG
TTGATTACCA CGGCAGGTCT GCCGCACGAT GTACCTTCCC AAAAGGGTAA GTACCTTGAG
GCGAGCCTTG ACCATGCCCT GTGGTACCAT CGTGATTTCC GGATGGATGA GTGGGTCCTT
TATGTCGCCG AGAGCCCGAG TGCTTCCAAT GCTCGTGGTT TTTCGCAGGG GCAGTTTTTT
TCCCGTGACG GCAGACTTAT TGCTTCTGTG GCTCAGGAAG GGCTGATACG AGAGCGTCGT
TTGTCAGTCG CTTGA
 
Protein sequence
MKQILPEILE LEQIEENLYR GLSQNLGVNR IYGGQVLGQA LAAAGKTVIG RKAHSFHAYF 
LLMGDNKLPV MYEVDRIHEG HSFATRRVVA IQRGRAIFAM TASFQIEEKG LEHQASMPEV
PAPEELPTLV ETLGKMAAPN RRLQNFFNNF PIEIRPVKPV NPYASGMYLP FSSVWLRSTD
RLSDCVGFHQ AALAYASDYG LITTAGLPHD VPSQKGKYLE ASLDHALWYH RDFRMDEWVL
YVAESPSASN ARGFSQGQFF SRDGRLIASV AQEGLIRERR LSVA