Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2238 |
Symbol | |
ID | 3738192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2530752 |
End bp | 2531606 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637779530 |
Product | Acyl-CoA thioesterase |
Protein accession | YP_385190 |
Protein GI | 78223443 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1946] Acyl-CoA thioesterase |
TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.58681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0000000000102544 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACAAA TATTGCCAGA GATCCTTGAA CTCGAACAGA TTGAGGAGAA CCTTTACCGG GGACTCAGTC AGAATCTTGG CGTTAACCGA ATCTATGGTG GCCAGGTTCT CGGTCAGGCC TTGGCTGCCG CAGGAAAAAC TGTTATTGGA CGTAAGGCTC ATTCTTTCCA CGCCTATTTT CTCCTCATGG GTGACAATAA GCTTCCGGTC ATGTATGAGG TGGACCGTAT TCATGAGGGT CACAGTTTTG CGACCCGCAG AGTGGTGGCC ATCCAGCGTG GGCGTGCGAT CTTTGCCATG ACGGCATCGT TTCAGATCGA AGAGAAAGGA CTTGAACACC AAGCTTCCAT GCCCGAGGTT CCTGCCCCCG AAGAACTTCC GACCTTGGTT GAAACCTTGG GAAAGATGGC CGCTCCCAAC AGGCGCCTGC AGAACTTTTT TAATAATTTC CCTATTGAAA TACGTCCCGT TAAACCCGTT AATCCCTATG CATCTGGCAT GTATCTTCCT TTTTCAAGTG TATGGCTTCG ATCTACAGAC CGGCTTTCCG ACTGTGTCGG GTTCCACCAA GCCGCCTTGG CCTACGCTTC TGACTATGGG TTGATTACCA CGGCAGGTCT GCCGCACGAT GTACCTTCCC AAAAGGGTAA GTACCTTGAG GCGAGCCTTG ACCATGCCCT GTGGTACCAT CGTGATTTCC GGATGGATGA GTGGGTCCTT TATGTCGCCG AGAGCCCGAG TGCTTCCAAT GCTCGTGGTT TTTCGCAGGG GCAGTTTTTT TCCCGTGACG GCAGACTTAT TGCTTCTGTG GCTCAGGAAG GGCTGATACG AGAGCGTCGT TTGTCAGTCG CTTGA
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Protein sequence | MKQILPEILE LEQIEENLYR GLSQNLGVNR IYGGQVLGQA LAAAGKTVIG RKAHSFHAYF LLMGDNKLPV MYEVDRIHEG HSFATRRVVA IQRGRAIFAM TASFQIEEKG LEHQASMPEV PAPEELPTLV ETLGKMAAPN RRLQNFFNNF PIEIRPVKPV NPYASGMYLP FSSVWLRSTD RLSDCVGFHQ AALAYASDYG LITTAGLPHD VPSQKGKYLE ASLDHALWYH RDFRMDEWVL YVAESPSASN ARGFSQGQFF SRDGRLIASV AQEGLIRERR LSVA
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