| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2080 |
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| Symbol | |
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| ID | 3739531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2339231 |
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| End bp | 2341138 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637779374 |
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| Product | respiratory-chain NADH dehydrogenase domain-containing protein |
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| Protein accession | YP_385034 |
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| Protein GI | 78223287 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
[COG3411] Ferredoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0310665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGGT TAAGCTCCCC TGAAAAATTG GAATGTGCCA GGAAGGACAT CGTCTCCCGC
ATTGACCCGA CCAAGCCGTG CATCTCGGTA TGCGCCGGTG CCGGCTGCCT CGCCTCCGGG
GCAGCCGAGG TCATCGCGGC CTTCAAGACG GAGCTTGAAT TCCATGGCCT GACGACTGAA
GTGAACACCA AGGGAACCGG CTGTCCCGGC TTTTGCGAAC GCGGGCCCAT CGTGATGATC
TACCCCGAGG GGATCTGCTA TCTCAAGGTG AAGCCCGAGG ACGTACCCGA GATCGTCTCC
CACACCATCA AGGAGAAAAA GGTGGTGGAC CGCCTCCTCT ACGAGGATCC GGCCACGGGA
ACAAGGGCGC TGCGGGAGTC GGATATTCCC TTCTACAAGA ACCAGCAGCG CAACATCCTC
AGCGAGAACC TCCGGCTCGA TTCCAAGAGC ATGGACGACT ATCTCGCCAT CGGCGGCTAC
TCGGCCCTCT CCAAGGTTCT CTTCCAGATG ACCCCGGAAG ACGTGATGGG GGAGATCAAG
AAGTCGAACC TGCGGGGGAG GGGAGGGGGC GGATTCCCCG CCTGGCGCAA GTGGGAAGAG
TCCCGCAATG CCCCGGACCC GATCAAGTAC GTGATCGTCA ACGCCGACGA GGGTGACCCC
GGCGCCTTCA TGGACCGGGC GCTCATCGAG GGGAATCCCC ACTCGATCCT CGAAGGCCTG
ATCATCGGCG CCTATGCGGT CGGTGCCCAT GAGGGGTTCA TCTACGTCCG CCAGGAATAT
CCCCTGGCCG TCGAGAACAT CAACCTCGCT ATCCGGCAGG CCAGTGAGCG CGGGTTCGTC
GGCAAGGATA TCCTCGGGTC GGGTTTTGAT TTCACCGTCA AGGTCCACAT GGGTGCCGGC
GCCTTTGTCT GCGGCGAATC CTCGGCACTC ATGACGGCTC TGGAGGGGCG AGCCGGCGAG
CCGCGGCCCA AGTACATTCA TACCGCTGTC AAGGGGGTCT GGGACCACCC GAGCGTCCTG
AACAACGTAG AGACCTGGGC AAACGTTACC CAGATCATCA CCAAGGGGGC GGACTGGTTC
ACCTCGTACG GCACCGCGGG GAGCACGGGG ACCAAGATCT TCTCCCTGGT GGGGAAGATC
ACCAATACCG GCCTCGTGGA AGTGCCGATG GGCGTTACCC TGAGGGACAT CATCACGAAA
GTGGGGGGAG GCATACCGGG AGGCAAAAAG TTCAAGGCCG TTCAGACCGG CGGCCCCTCC
GGCGGCTGCA TCCCCGAGGC GATGCTGGAC CTGCCAGTGG ATTTCGACGA ATTGACCAAG
GCAGGCTCCA TGATGGGTTC CGGCGGCATG ATCGTCATGG ACGAAGACAC CTGCATGGTG
GACATCGCCC GGTACTTCAT CGACTTCCTC AAGGACGAAT CGTGCGGCAA GTGCACCCCG
TGCCGGGAGG GTATCCGCCA GATGCTGGCG GTCCTCACCA GGATCACCGT CGGCAAGGGG
AAAGAGGGGG ACATCGAGCT TCTGGAGGAG TTGGCCGAGT CCACGGGAGC GGCCCTCTGC
GCCCTGGGCA AGAGTGCTCC CAACCCGGTC CTCAGCACCA TCCGCTACTT CCGTGATGAG
TACGAGGCCC ACATCAGGGA GAAGAAATGC CCGGCCCTCT CATGCAAGGA GATGATCGCC
TTCCATATCG ATCCGGAGAA GTGCAAGGCC TGCGGCAGCT GCTTCAGGCA GTGCCCCGCC
GAGGCGATCC AGGGCGGCAA GAAGCTGATT CACATCATCG ACCAGGAAAA GTGCACGAAG
TGCGGAACCT GCCTGGACGT CTGCCCGTCA CGCTTCGGCG CGGTGCGGAA GATTTCCGGC
GAACCGGTTC CGGCCCCTGT CCCTGAAGAC AAACGAGCTA TTGCCTGA
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| Protein sequence | MTRLSSPEKL ECARKDIVSR IDPTKPCISV CAGAGCLASG AAEVIAAFKT ELEFHGLTTE
VNTKGTGCPG FCERGPIVMI YPEGICYLKV KPEDVPEIVS HTIKEKKVVD RLLYEDPATG
TRALRESDIP FYKNQQRNIL SENLRLDSKS MDDYLAIGGY SALSKVLFQM TPEDVMGEIK
KSNLRGRGGG GFPAWRKWEE SRNAPDPIKY VIVNADEGDP GAFMDRALIE GNPHSILEGL
IIGAYAVGAH EGFIYVRQEY PLAVENINLA IRQASERGFV GKDILGSGFD FTVKVHMGAG
AFVCGESSAL MTALEGRAGE PRPKYIHTAV KGVWDHPSVL NNVETWANVT QIITKGADWF
TSYGTAGSTG TKIFSLVGKI TNTGLVEVPM GVTLRDIITK VGGGIPGGKK FKAVQTGGPS
GGCIPEAMLD LPVDFDELTK AGSMMGSGGM IVMDEDTCMV DIARYFIDFL KDESCGKCTP
CREGIRQMLA VLTRITVGKG KEGDIELLEE LAESTGAALC ALGKSAPNPV LSTIRYFRDE
YEAHIREKKC PALSCKEMIA FHIDPEKCKA CGSCFRQCPA EAIQGGKKLI HIIDQEKCTK
CGTCLDVCPS RFGAVRKISG EPVPAPVPED KRAIA
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