Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2070 |
Symbol | |
ID | 3739521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2328262 |
End bp | 2330253 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637779364 |
Product | hypothetical protein |
Protein accession | YP_385024 |
Protein GI | 78223277 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000208921 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGCTA CCCGCGAACT CTATTGGAAT ATCGGCCACG GGGCATCGGT CCTTATACCG ATGTATCTCT TCACCTTCGC TGCCCTGGGA TTTCTGGTGC GAAGCGGGTT GCAGCGGCTG GATATCTACA AGCAGGGAAA GCCCCTGAAC CGCTTTGACC AGCGTGGCGT GCGCATTGTT CAGCTCCTGA AGAACGTCCT GCTGCAGAGC AGGGTGCTGA AGGTAAAGGG GCCGGGCTAT GCACACGGGC TCTTCTTCTG GGGGTTCTTC CTCCTCTTTA TCGGAACTGT TTTCGTGGCT CTCCAGGCCG ACTTCACCGA TCTCCTCTTC GGGTTCCGCT TCCTTCACGG GGACTTCTAT CTCATCTTCT CGGCAGTGCT CGACATTGCC GGTCTCGTGG CCATCGCCAT GCTGGCCGGG TTCTTCGTCC GCCGCTACCT GGTGCGCCCC GATGGACTTG AAACCACCCG CGACGACGCC ATCATGCACG GCCTCCTCTT CGCCATCCTC ATCACCGGTT TTGTCATCGA AGGGGCCCGG ATGGCCGTGA CCGAACTCCC TAACAACATG GCCCTGGCGG CGTGGTCGCC GGTTGGCCTC GTGGTGGCCA AGGGACTCTC CGGCATGGGT GAGGGTTCCC TCCGGGCCCT CCACCAGGGG ATGTGGTGGC TCCACTTCGC TCTCGTCATC GGCTTTATCT GCTCCATACC CTTCACCAAG TTCCGGCATA TCCTCACCAC GAGCGCCAAC TACTTCCTGG CCGACCTCGG TCCCAAGGGT GCCCTCGTCA CCCTCAACAT GGAGAGCGAG GACGCCGAGA GCTTCGGTGC GGCCCAGATC AAGGATATGA CCTGGAAAGA CATCTTCGAC ACCGACGCCT GCACCAAGTG CAAGCGTTGC CAGGACCGGT GTCCGGCCCA CAACACCGAC AAGCCCCTCT CCCCCATGAA GGTCATCAAC CAATTGGGAG AGGTGGCCGG CACCAATCCC GACGCGAACC TGATAGAGAC CGTGAGCAAG GATGCCCTCT GGTCCTGCAC CACCTGCCGG GCATGCCAGG AGATCTGCCC GGCCAGCATC GAGCATGTGG GTAAGATCGT GGACATGCGC CGCAACATGG TGCTGATGGA AGGGGAGTTC CCCGGCGAAG AGGTCATGGT GGCCATGGAC AACACCGAGG TAAACGGCAA CCCCCTCGGT CTGGCGTTCG CCTCCCGGGG CGACTGGGCC GAAGGGCTCC CGGTCACACG CCTCTCCGAC GACGCCGAGG TGGACATCCT CTACTTTGTC GGCTGCTATG CCTCCTTTGA CAAGCGCAAC ATCAAAGTAG CCACCAGCTT CGTTCAGCTC TGCGCCGCTG CCGGCGTCAA GGTCGGCATC CTCGGCAAAG AGGAGAAATG CTGCGGCGAG CCGATGCGGA AACTGGGGAA CGAATACCTC TACCAGTCCA TGGCCACCGA GAACATCGAG ACCATGGAGT CCTACAAGGT GAAAAAGGTC GTCACCGCCT GTCCCCACTG CTTCAATACC CTGACCAAGG ATTACCGTGA TCTCGGCTTC AGCATCGAGA CCGAGCACTA CACCACCTTC CTGAACCGCC TTATCCAGGA AGGGAAACTC AAGGTGAAGG GCGATGCCTT CGACTGCACC TATCACGACT CCTGCTATAT CGGCCGCCAC AACGACCTCT ATGAAGAGCC TCGGGCCTTG GTGGCGGCAG CGGGGGGCAC CATCCGCGAG ATGGAGCGGA GCAGGGCGGA GGGCTTCTGC TGCGGCGCCG GCGGCGGGCG GATCATGGCC GAGGAGAAAC TGGGGAGCCG GATCAGCGGC AAGCGCGCAC TGATGGCGGC GGAAACCGGC ACCGGCACCC TCGTATCCAA CTGTCCCTTC TGTCTCACCA TGTTCGAGGA CGGGATCAAG GGAGCGGAGC TGGAAGGGAA GCTCGTTCCC CGGGATATTG CCGAGATCCT GGTGGAAAGG GTGATTGCCT GA
|
Protein sequence | MEATRELYWN IGHGASVLIP MYLFTFAALG FLVRSGLQRL DIYKQGKPLN RFDQRGVRIV QLLKNVLLQS RVLKVKGPGY AHGLFFWGFF LLFIGTVFVA LQADFTDLLF GFRFLHGDFY LIFSAVLDIA GLVAIAMLAG FFVRRYLVRP DGLETTRDDA IMHGLLFAIL ITGFVIEGAR MAVTELPNNM ALAAWSPVGL VVAKGLSGMG EGSLRALHQG MWWLHFALVI GFICSIPFTK FRHILTTSAN YFLADLGPKG ALVTLNMESE DAESFGAAQI KDMTWKDIFD TDACTKCKRC QDRCPAHNTD KPLSPMKVIN QLGEVAGTNP DANLIETVSK DALWSCTTCR ACQEICPASI EHVGKIVDMR RNMVLMEGEF PGEEVMVAMD NTEVNGNPLG LAFASRGDWA EGLPVTRLSD DAEVDILYFV GCYASFDKRN IKVATSFVQL CAAAGVKVGI LGKEEKCCGE PMRKLGNEYL YQSMATENIE TMESYKVKKV VTACPHCFNT LTKDYRDLGF SIETEHYTTF LNRLIQEGKL KVKGDAFDCT YHDSCYIGRH NDLYEEPRAL VAAAGGTIRE MERSRAEGFC CGAGGGRIMA EEKLGSRISG KRALMAAETG TGTLVSNCPF CLTMFEDGIK GAELEGKLVP RDIAEILVER VIA
|
| |