| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1989 |
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| Symbol | |
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| ID | 3739211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 2218831 |
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| End bp | 2220159 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637779283 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_384943 |
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| Protein GI | 78223196 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0000357818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACT CAACAAAACC CCTTCAAACC CGCACCCGCT TCACCCTTAT CCAGAAACTC
ATCGTCAGTT ATGTCGCGAT GCTCTTTCTG ACCACGACGG CCCTCGCCTT TTCGGTTATG
GGGCTTTATT CCCTCAATCG TACCGCAAAG GAAATAGCGA AAACCGATCT TTTTATAATC
GATTCCGCGA ATCGTCTCCG GGAATCAATG TTGGCCCAGG AACGTATCGC GGGGAAATAT
GCAATCCTCA AGAGCGACGA ATTCAAACTT CTCTACAGTC AGCGCCAGTC TGAATTCCTG
GCAATTCTCG GCGAAATTGG CCAGCGGGAC AACAACGGTC TCTTCCGCTC CCTGGTTGCC
AGATACGATG CTTATCGGAA GGAAATTGAA CGCGCCTTCG CCGCCAGCAC CACTGAGCCC
TTGCCCGCCA AAAAGGAGGC CGACGCCGTC GTAAGCCTGA TCGAAGATCT TTCCTCTTCC
CGGCAAAAGC TCCTTGGGAA AAAGCTGGCG GAAGCCGACC GGCGCGAGGC CGACACGGTA
AAACTAACCC TCTTCCTGGC ATTTTCAGGC TTTATCCTTG CTGTTACCGT AGCGGCACTC
AACGTACACT CCATATCCAC CTCCATAAGA AAACTCAAAA AGGGAATGCA CCGGATAGCA
GAAGGTGACT TCGATTACGA CCCCCAAATT CCCATCGGTG ACGAAATCGG TGCCCTGGCA
GAGGATTTCT CACGCATGGG GAAAAAATTA AAGGAACTGG AGCAGATCAG CCTCGACGCA
AGTCCGCTGA CCCGGCTCCC CGGCAACATT GCCATCGAGC GAGTGCTGAA CAAACTTCTC
CAATCCGGTG AACCCTTTGC GGTCTGCTAT GCCGATCTCG ATAATTTCAA GGCCTACAAT
GACCGTTACG GTTACATCAA AGCTAGCGAA GTAATTAAAT TGACCGCGGA ACTGATCCAC
GATACAGTTC GTGAACTTGC CGGTGGCAAC GCTTTCGTCG GCCATGTGGG AGGTGATGAT
TTCGTAATGG TTGTGGCGGC CGAACGGGGG GGCTCCCTCT GTGAAGCGGT CATAAAAAGG
TTTGACGACT TCATCCGCAA CCATTATTCG GCAGAGGATC TGGCTCGTGG CGCCATTGAA
GGTGTTGACC GCTATGGCGT TTCCCGCACC TTCCCCATCA TGAGCATCTC TGTGGCCGTC
GTTATCAGTC AACAGGGAGA GTTCACCTCG GCGGTGCAGA TAGCAAAGGC GGCGGCCGAC
ATCAAGGATC TGCTGAAAAA ATCTCCCGGC AGCAACTACC TGATCAACCG ACGCAGGAAT
CCCCGATGA
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| Protein sequence | MSDSTKPLQT RTRFTLIQKL IVSYVAMLFL TTTALAFSVM GLYSLNRTAK EIAKTDLFII
DSANRLRESM LAQERIAGKY AILKSDEFKL LYSQRQSEFL AILGEIGQRD NNGLFRSLVA
RYDAYRKEIE RAFAASTTEP LPAKKEADAV VSLIEDLSSS RQKLLGKKLA EADRREADTV
KLTLFLAFSG FILAVTVAAL NVHSISTSIR KLKKGMHRIA EGDFDYDPQI PIGDEIGALA
EDFSRMGKKL KELEQISLDA SPLTRLPGNI AIERVLNKLL QSGEPFAVCY ADLDNFKAYN
DRYGYIKASE VIKLTAELIH DTVRELAGGN AFVGHVGGDD FVMVVAAERG GSLCEAVIKR
FDDFIRNHYS AEDLARGAIE GVDRYGVSRT FPIMSISVAV VISQQGEFTS AVQIAKAAAD
IKDLLKKSPG SNYLINRRRN PR
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