Gene Gmet_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1988 
Symbol 
ID3739210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2217824 
End bp2218654 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content62% 
IMG OID637779282 
Productnicotinate-nucleotide pyrophosphorylase [carboxylating] 
Protein accessionYP_384942 
Protein GI78223195 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0157] Nicotinate-nucleotide pyrophosphorylase 
TIGRFAM ID[TIGR00078] nicotinate-nucleotide pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.103319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA TAGACAAGAT CATCGAAAAC GCCCTCATGG AGGATATTCA TACCGGGGAT 
ATCACGACTC TGGCGGTGGT TCCCGGGAGC CGTCCGGCCC GCGCCCGACT CATCGCCAAG
GAGCCCCTGA TTCTGGCTGG CATTGACGTG GCGGCCCGGG TCTTCACGTT CCTTGACGCG
TCGGTCTGTT TTGAGGCACG ACATGGGGAC GGAGCGCGGC TAGCTGCCGG CGATCTGATT
GCCGAGCTTA CCGGCGACTC CGCTCTCCTC CTCCAGGGTG AGCGGGTGGC TCTCAACCTG
CTTCAGCGCA TGTGCGGCAC CGCGACCCTT ACGGCCAGGT ATGTGGAGGC CGTGGCGGGA
ACGCGGGCTC GCATCGTTGA TACGCGGAAG ACAACTCCGG GGCTCCGGGT CCTGGAGAAA
TACGCCGTTC GGGTTGGCGG GGGAATCAAC CACCGCACCG GCCTCTATGA CGGTGTCCTC
ATCAAGGAGA ACCACATCGC CGCCGCGGGC GGCATCAGCC GGGCCGTAAG CCGGGCACGG
TCCTACATCC CCCATACCCT GAAAATTGAG GTGGAGACCG AATCCATCGC GGAGGTGACC
GAAGCACTTG AGGCCGGTGC CGATATCATC ATGCTCGACA ATATGGATCT GCCGACGATG
ACTGAGGCGG TGGCCCTCAT TGGTGGCCGT GCCCTGGTGG AAGCCTCGGG GGGGGTAAAC
CTCGAAACAG TCAGAGGAAT TGCCGAGGCA GGGGTTGACA TCATTTCCGT GGGGGCGCTT
ACCCATTCTG CCCGAGCCAT GGACATCTCG ATGCTTCTGG AGGCTGAGTG A
 
Protein sequence
MTGIDKIIEN ALMEDIHTGD ITTLAVVPGS RPARARLIAK EPLILAGIDV AARVFTFLDA 
SVCFEARHGD GARLAAGDLI AELTGDSALL LQGERVALNL LQRMCGTATL TARYVEAVAG
TRARIVDTRK TTPGLRVLEK YAVRVGGGIN HRTGLYDGVL IKENHIAAAG GISRAVSRAR
SYIPHTLKIE VETESIAEVT EALEAGADII MLDNMDLPTM TEAVALIGGR ALVEASGGVN
LETVRGIAEA GVDIISVGAL THSARAMDIS MLLEAE