Gene Gmet_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1980 
Symbol 
ID3739202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2209556 
End bp2210137 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content52% 
IMG OID637779274 
Producthypothetical protein 
Protein accessionYP_384934 
Protein GI78223187 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0006793 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.0779931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATT TCATTGCCCG TTTGTTCGTT TTCGCCCTGA CACACTCGAT CCTTGCACTT 
CCCGCACTTC AAAGGCGCAT GGGGGATATA TTCCCGCGTC TTGGGCGCTT CTACCGCTTC
GCGTACAACC TGGTCGCCCT CGTGACGTTC ACCTGGGCAC TGTCTGCATG GCACTTTTCA
CCGGTTGTTT ATATTGTGCC AGGCACGGGG AGCCTCATAT TTTATCTTAT TCAGCTTGTT
TTCATTGTTC TTCTTGCCCG GTGCGCGGCC CAGACCGGCA TTGACGAGTT GCTCGGGCTG
AGACAGATGC GCGGCACTCC CGGCAGTAAG CAGTTAGTAA CCACCGGATG CTACGCAAGG
GTACGACATC CGCTCTACTC ACTGTCGGTC GTCTTTCTGG CTCTCAACCC GGTAATGACC
CTCAAATGGT TGCTGCTAAC AGTTTTCTCA GCGGTATATT TCGTAATTGG GGCACGAATA
GAGGAGCGAA GGTTGATTGC CGAATACGGC GAAACGTATC GGAACTATCA GAAAAATGTA
CCGATGTTCA TTCCGGCAAA AAAGGAGGTT CCACGGTTAT AG
 
Protein sequence
MADFIARLFV FALTHSILAL PALQRRMGDI FPRLGRFYRF AYNLVALVTF TWALSAWHFS 
PVVYIVPGTG SLIFYLIQLV FIVLLARCAA QTGIDELLGL RQMRGTPGSK QLVTTGCYAR
VRHPLYSLSV VFLALNPVMT LKWLLLTVFS AVYFVIGARI EERRLIAEYG ETYRNYQKNV
PMFIPAKKEV PRL