Gene Gmet_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1948 
SymboltpiA 
ID3741599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2176614 
End bp2177369 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content51% 
IMG OID637779240 
Producttriosephosphate isomerase 
Protein accessionYP_384902 
Protein GI78223155 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000540949 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACAC CGATTATTGC TGGCAATTGG AAACTCTTCA AAAAGAGCAG CGAAGCACAA 
GACTTCGTTG CCGAACTGAT CCCTCTCGTC CAGAAAACCA CTGACGTGGA AATCGTTATT
GCGCCTGTAT TTACCGTTCT TTCTGCCGTT AAACGAGCCA TTGCCGATTG CAACATAATG
CTTTCTGCTC AAGATTGCTT CTGGGAAGAG GAAGGGGCCT TCACCGGCGA AATTTCTCCC
GGCATGCTTG TGGACGCCGG ATGCAGCCAT GTTATAATTG GCCATTCCGA GCGGAGGCAG
TATTTTGGTG AAACCGACGA AACCGTCAAC CGGAAGATCA AGGCGGCTAT TACAGCAGGT
CTTACAGTCC TTTTCTGCAT CGGTGAAACA CTTGCCGAAC GTGAAGCAGA CAAAACCTTT
GAGGTGCTCA GGACCCAGAT CGAGAATGGT TTGGCCGGAC TCGCAAGGGG CGATCTTGCC
AAAATCGTAA TTGCGTACGA ACCGGTCTGG GCCATAGGTA CCGGTAAAAC CGCCACTGAT
GAGCAGGCAC AGATAGCGCA TGCATTCATC CGCAAGGTCG TGGGCGAGCT GTTTACCGTC
CAGATAGCCG AAACTATTCG TATACTCTAT GGCGGAAGCG TAAAACCGGA AAATGTCAGA
GGGCTCATGA ATCAACCTGA CATCGACGGC GCTTTGGTGG GTGGAGCGAG CCTCAAGGCA
GACTCATTTG GAGCAATCGT CAACTATAAA GCGTAA
 
Protein sequence
MRTPIIAGNW KLFKKSSEAQ DFVAELIPLV QKTTDVEIVI APVFTVLSAV KRAIADCNIM 
LSAQDCFWEE EGAFTGEISP GMLVDAGCSH VIIGHSERRQ YFGETDETVN RKIKAAITAG
LTVLFCIGET LAEREADKTF EVLRTQIENG LAGLARGDLA KIVIAYEPVW AIGTGKTATD
EQAQIAHAFI RKVVGELFTV QIAETIRILY GGSVKPENVR GLMNQPDIDG ALVGGASLKA
DSFGAIVNYK A