Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1948 |
Symbol | tpiA |
ID | 3741599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 2176614 |
End bp | 2177369 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637779240 |
Product | triosephosphate isomerase |
Protein accession | YP_384902 |
Protein GI | 78223155 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000000000540949 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACAC CGATTATTGC TGGCAATTGG AAACTCTTCA AAAAGAGCAG CGAAGCACAA GACTTCGTTG CCGAACTGAT CCCTCTCGTC CAGAAAACCA CTGACGTGGA AATCGTTATT GCGCCTGTAT TTACCGTTCT TTCTGCCGTT AAACGAGCCA TTGCCGATTG CAACATAATG CTTTCTGCTC AAGATTGCTT CTGGGAAGAG GAAGGGGCCT TCACCGGCGA AATTTCTCCC GGCATGCTTG TGGACGCCGG ATGCAGCCAT GTTATAATTG GCCATTCCGA GCGGAGGCAG TATTTTGGTG AAACCGACGA AACCGTCAAC CGGAAGATCA AGGCGGCTAT TACAGCAGGT CTTACAGTCC TTTTCTGCAT CGGTGAAACA CTTGCCGAAC GTGAAGCAGA CAAAACCTTT GAGGTGCTCA GGACCCAGAT CGAGAATGGT TTGGCCGGAC TCGCAAGGGG CGATCTTGCC AAAATCGTAA TTGCGTACGA ACCGGTCTGG GCCATAGGTA CCGGTAAAAC CGCCACTGAT GAGCAGGCAC AGATAGCGCA TGCATTCATC CGCAAGGTCG TGGGCGAGCT GTTTACCGTC CAGATAGCCG AAACTATTCG TATACTCTAT GGCGGAAGCG TAAAACCGGA AAATGTCAGA GGGCTCATGA ATCAACCTGA CATCGACGGC GCTTTGGTGG GTGGAGCGAG CCTCAAGGCA GACTCATTTG GAGCAATCGT CAACTATAAA GCGTAA
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Protein sequence | MRTPIIAGNW KLFKKSSEAQ DFVAELIPLV QKTTDVEIVI APVFTVLSAV KRAIADCNIM LSAQDCFWEE EGAFTGEISP GMLVDAGCSH VIIGHSERRQ YFGETDETVN RKIKAAITAG LTVLFCIGET LAEREADKTF EVLRTQIENG LAGLARGDLA KIVIAYEPVW AIGTGKTATD EQAQIAHAFI RKVVGELFTV QIAETIRILY GGSVKPENVR GLMNQPDIDG ALVGGASLKA DSFGAIVNYK A
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