| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1935 |
|---|
| Symbol | |
|---|
| ID | 3738119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2160839 |
|---|
| End bp | 2161732 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637779227 |
|---|
| Product | farnesyl-diphosphate synthase |
|---|
| Protein accession | YP_384889 |
|---|
| Protein GI | 78223142 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTTA AAAACTATCT CAAAGAACGC TGTGCCATTG TTGATGAAGC TCTTGAACGC
TCCCTGCCCG GTGAGGGGGA CCTTCCCGTT TCCGTTCATC GCGCCATGCG CTATTCGGTT
TTCGCAGGGG GGAAACGGAT TCGGCCGGTT CTGATGCTCG CCGCCTGTGA GGCGGTGGGA
GGAACTCCGG ACTTGGCGCT TCCCGCTGCG TGCGCCATGG AGATGATCCA CACCTATTCC
CTCATCCACG ACGATCTCCC CGCAATGGAC GACGACGATT TCCGCCGCGG ACGTCCCACA
AACCACAAGG TTTTCGGCGA GGCAATCGCC ATCCTTGCCG GTGATGCGCT CCTTACGGAA
GCGTTCATCC TCATGAGCTC TCCCGAATAC GCCGCAAAGG CCGGACATGC CCGTATTCTT
CCGGTTATCC ACGAGATTGG CATCTGTGCC GGTTCCCGGG GGATGGTCGG CGGCCAAGTA
GTCGACATGG AGAGCGAGGG GAAAAAGGAT ATCGATCTGG CCACGGTCCA GTACATACAC
ACCCACAAGA CCGGCGCCCT CATGAAGGCT TCGGTCAAGG CGGGCGCAAT ACTCGGCGGA
GCGGAAGGGG ACGCCCTTGC GGCCATGACC CGTTACGGCG AGGCCATCGG CCTTGCGTTC
CAGATTGCCG ATGACATCCT TGACATCGAG GGTACCACCG AGCAGATCGG CAAGGATGCG
GGGAGCGACG AAGCCCGGGG GAAAGCCACC TATCCGGCGG TCATGGGGCT TGCCGATTCC
AAACGCCGCG CCCAGGAGTT GGTGGATCTG GCCCTCGAAG CCCTTTCCCC CTTCGGCGAG
AAAGCGGAAC CCCTGCGGGA GATCGCCCGT TACATCGTAT CCCGGAAATC GTAA
|
|---|
| Protein sequence | MDLKNYLKER CAIVDEALER SLPGEGDLPV SVHRAMRYSV FAGGKRIRPV LMLAACEAVG
GTPDLALPAA CAMEMIHTYS LIHDDLPAMD DDDFRRGRPT NHKVFGEAIA ILAGDALLTE
AFILMSSPEY AAKAGHARIL PVIHEIGICA GSRGMVGGQV VDMESEGKKD IDLATVQYIH
THKTGALMKA SVKAGAILGG AEGDALAAMT RYGEAIGLAF QIADDILDIE GTTEQIGKDA
GSDEARGKAT YPAVMGLADS KRRAQELVDL ALEALSPFGE KAEPLREIAR YIVSRKS
|
|---|
| |