| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1918 |
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| Symbol | |
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| ID | 3738102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 2143212 |
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| End bp | 2145164 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637779210 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_384872 |
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| Protein GI | 78223125 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.204421 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTGG CCGTAAACCC TTCTTCTCTT CGAGTCCTCA TCATCGATGA CTCTCCTTTC
GATACCGAAC TGGTAATTCG CGAGCTCAAC AGTTGTTTCA TCACCCATTT CCGCAGAGTA
GACACGGCGG AAGAAATGCT CGATGCCCTT GCAAGCGCGA CGTGGGATAT CGTGATTTCA
GACTACGTGA TGCCCAGCTT CAGCGGCCTC AATGCCATCG CCCTCCTCAG GAAGGAGGGA
TACACGACGC CGCTCATCGT GGTCTCAGGC AAGATTGAAG ATGAGGCCGC CGTAGAAACC
ATGCGGGCCG GTGCCAACGA TTACATCCTC AAGGACAATC TTGCGCGACT GGTTCCTGCC
ATCCGGCGCG AGCTTGAGGA ATCAGAGGTC AGGCGGCAGA AAAAGAAGGT CGAGGATGAG
CTGCGCAAGC TATCCCATGC CGTGGAGCAG AGTCCGGTAT CCATCATTAT CACCGACCAA
AACGGCACCA TAGAATACGT GAACCCTAAA TTCACCCAGG TTACCGGATA TGGCGTCGAC
GAGGCCGTAG GGCAGACCCC GCGTATTCTC AAATCGGGCA AAATGCCTGA CAGCGAGTAT
CGGCGCCTCT GGGAAACAAT CACCTCCGGC CGCGAATGGC ATGGCGATAT AATCAACAAG
AAAAAGAACG GTGATCTGTT CTGGGAACGG GCATCTATTT CGGCCATCAA GGATGCCGAA
GGTGTCATAA CCCATTTTGT TGGAGTGAAG GAAGATATCA GCGAACAGCG ACGGACAGAA
CTGGCACACA AACAGGCCAT GAACCAACTC CGCCAGGCCC AGAAGATGGA AGCCATTGGC
CAATTGGCAG GGGGTATCGC CCATGATTTC AACAACCTTC TTACCGTAAT CAACGGTTAC
AGCACCATGC TGCTCCACGA GATGCCGGTC GACGACCCCT TCCGCTCCGA GGTTAACGAG
ATCCTCAAGG CCGGCGAGCG GGCTGCCGAC CTCACCCACC AACTCCTTGC CTTCAGCCGC
CGCCAGATGC TTGAGCCCAA GGTGATCAAC ATCAACCATC TGGTCAGAAA CATGGAGAAG
ATGCTGAAGC GGCTGATCAG GGAAAACATC GTCATGCATG CCAGTCTTTA CGAGCAACTT
GGCGTTGTGA AGGTTGACCC GGGACAGGTG GAGCAGATCA TCATGAATCT GCTGGTGAAC
GCCAGAGATG CTCTGGGTAA CGGCGGCATC ATAACCATCG AAACTGCCGA TGTCTATCTG
GACAAGACGT TTGTAAACGA AAACCCAGGG GCGGTTGAAG GTAATTATGT CATGTTGGCG
GTTCACGACA ACGGAGAGGG GATGACCGAA GAAACCAGGC GCAAGATCTT CGAACCCTTT
TTCACCACCA AGGGGCAGGG AAAAGGGACC GGCCTCGGTC TCGCCACAGT GTACGGCATC
GTCAAACAGA GCGGCGGATA CATTCAGGTA GCCAGCGAAC TTGGCCAGTG GACATCGTTT
CGGGTGTATT TCCCCCGCGT CGATTCCGAA GCATGGCAGG AAGAAACCGT TACAAGTCAC
GAAGGGCCAA AGGGTAATGA AACTATCCTG GTTATTGAAG ATGAAATCGG TGTGCTGAAC
CTCACCGCCC ATACCCTGAA ACGGAATGGC TACGAAGTGC TCCAGGCGAG TTCCCCCTCT
GAGGCGAGTA GAATCTTTTC CACCAACCAC CACCGGATTG ATCTTGTCCT CTCCGATGTT
ATCATGCCCG AAAAAAATGG CCCAGCGCTG GTGCGGGAAT TCAGGGAGAA ACTCCCTGAT
CTAAAAATCC TATTCATGTC GGGTTACACG GATGATACGA TATCGTCCCC ACAAATTATC
GATGAGCACG CAGCCTTTAT CAACAAGCCT TTCACGCCCG ATGTGCTGGT CGAACGTGTG
CGGGATGTCC TTGAGGGCCG GCTGAATATG TAA
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| Protein sequence | MTVAVNPSSL RVLIIDDSPF DTELVIRELN SCFITHFRRV DTAEEMLDAL ASATWDIVIS
DYVMPSFSGL NAIALLRKEG YTTPLIVVSG KIEDEAAVET MRAGANDYIL KDNLARLVPA
IRRELEESEV RRQKKKVEDE LRKLSHAVEQ SPVSIIITDQ NGTIEYVNPK FTQVTGYGVD
EAVGQTPRIL KSGKMPDSEY RRLWETITSG REWHGDIINK KKNGDLFWER ASISAIKDAE
GVITHFVGVK EDISEQRRTE LAHKQAMNQL RQAQKMEAIG QLAGGIAHDF NNLLTVINGY
STMLLHEMPV DDPFRSEVNE ILKAGERAAD LTHQLLAFSR RQMLEPKVIN INHLVRNMEK
MLKRLIRENI VMHASLYEQL GVVKVDPGQV EQIIMNLLVN ARDALGNGGI ITIETADVYL
DKTFVNENPG AVEGNYVMLA VHDNGEGMTE ETRRKIFEPF FTTKGQGKGT GLGLATVYGI
VKQSGGYIQV ASELGQWTSF RVYFPRVDSE AWQEETVTSH EGPKGNETIL VIEDEIGVLN
LTAHTLKRNG YEVLQASSPS EASRIFSTNH HRIDLVLSDV IMPEKNGPAL VREFREKLPD
LKILFMSGYT DDTISSPQII DEHAAFINKP FTPDVLVERV RDVLEGRLNM
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