| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1914 |
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| Symbol | |
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| ID | 3740318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2136521 |
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| End bp | 2137900 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637779206 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_384868 |
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| Protein GI | 78223121 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.943888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.00021307 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATAAAA TCCTCGTCGT CGAAGATGAT CGCTTCTTTC GGCAGATGTA TGTGGATCTC
CTCAAGGAAG ACGGATACGA GGTAGATACG GTGACCTCCG GTGCCCGGGC GCTGGAGCTT
CTTTCCGCCA ACGATTATCA GCTTGTCATC ACCGAGTTGG TCATTCCCGG CATGAGTGGT
ATTGAACTCC TGACAAGGGT AAAGCAGCAG ATGCCCACGG TGGATGTAAT CCTCGTGACC
GGGCACGCAA ATGTCGAATC TGCCGTGTTG GCCCTCAAAA GCGGCGCCCG TGATTACCTT
CTCAAACCCT TCAATCATGA AGAGTTCAAA CATACCGTTG CTCTCTGCTT CGAGCAGCGT
CGGCTCATCA ACGAGAACTA CGAACTGAAA GAGCTTCTGA ACCTCTTCCA GATCGGCCAG
AACATCGCCA ACTGCATCGA CATGGAACGC CTTTCAGCGG TAGTCCTTGA CGCCCTGACA
AATGAGATCG GTGCTGACAG GGCCATTGGC CTGTTCCATC ATAAGGACGA TAATCTTGCC
CTTAAGGAAT TCAAGGGGTT CAGCGAGGAG GCAGCTCAGA AACTTGCTGA GGCATTTCGG
AAAAATTTCT GTATCGAGAC CAATGATGGC TCGGTTATTA ACAAGATTAA TGCAACCCCC
CTTGTGTCGG GAGCGGAATT CGACGGATTA GAGCTCTCGG AAGGGCTTCT TCTTGTCATA
CGTTCCAAGG GAGAGGTTCA GGGGGTAGTA GTCATTTTCA ATAACCCCGG GCAGAAACTT
CCGTTCGACT ACAAGCAGAA GAGCATTCAG TTTCTTCTTG AGCAGTCAAC CCTCGCCTTT
GAGAACGCCT CCCGCTACTC GAATGCCAGG GACATGCTCT ATATCGATGA ACTGACCGGG
CTCTTCAACT ACCGCTACCT GGATATCTCT CTCGATCGGG AGATCAAGCG GGCAGACCGC
TTCGGCTCTA CGGTATCCAT GATCTTCATT GATCTGGATT TCTTCAAGGG GGTAAACGAC
ACCCACGGCC ACCTGGTGGG GAGTCAAGTC CTTAACGAAA TGGGGATGCT CCTCAAGAAA
TCCGTACGCG AAGTGGATAT CGTAATCCGG TACGGTGGCG ACGAATTTAC TGTCATGCTC
GTGGAGACGG GGGAGAAGGG GGCCGCCACC GTGGCCGAGC GGATCCGCCG TTCCATCGAG
GGGCACACAT TCCTGGCTGC CGAAGGATTC AACATTCGGC TCACTGCAAG CCTCGGCTAC
GCCTGTTATC CTGCCGACAC CCAGTCCAAG CTCGAACTCC TCGAACTGGC CGACAAGGCC
ATGTACCAGG GGAAGGAGCA GGGTAAAAAC TGTGTGTTCA GGGCAACTGC AATTCGTTGA
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| Protein sequence | MDKILVVEDD RFFRQMYVDL LKEDGYEVDT VTSGARALEL LSANDYQLVI TELVIPGMSG
IELLTRVKQQ MPTVDVILVT GHANVESAVL ALKSGARDYL LKPFNHEEFK HTVALCFEQR
RLINENYELK ELLNLFQIGQ NIANCIDMER LSAVVLDALT NEIGADRAIG LFHHKDDNLA
LKEFKGFSEE AAQKLAEAFR KNFCIETNDG SVINKINATP LVSGAEFDGL ELSEGLLLVI
RSKGEVQGVV VIFNNPGQKL PFDYKQKSIQ FLLEQSTLAF ENASRYSNAR DMLYIDELTG
LFNYRYLDIS LDREIKRADR FGSTVSMIFI DLDFFKGVND THGHLVGSQV LNEMGMLLKK
SVREVDIVIR YGGDEFTVML VETGEKGAAT VAERIRRSIE GHTFLAAEGF NIRLTASLGY
ACYPADTQSK LELLELADKA MYQGKEQGKN CVFRATAIR
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