| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1894 |
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| Symbol | |
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| ID | 3739171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2113008 |
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| End bp | 2116190 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637779186 |
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| Product | exodeoxyribonuclease V, RecC subunit |
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| Protein accession | YP_384848 |
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| Protein GI | 78223101 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1330] Exonuclease V gamma subunit |
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| TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000000000000164621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCCCTTT TCCTCTACTC CAGCAACCGG ATGGAGCACC TTGTCGACCG GCTTGTCGAG
GTGTTGCGGC GCCCCTTGGC CGCCCCCCTG GCGCCGGAGG TGATCGTTGT CCAGAGCAAG
GGGATGCAGC GCTGGCTCTC CATGGAGCTG GCAACGGCAA CCGGCGTCTG GGCCAACGGT
GCCTATCCGT TCCCCAATGC CTTTGTCTGG GACCTGTTCC GGAAGGCCCT GCCGGATCTC
CCCGCCGCAT CCCCCTTCGA CCCGGCGGTG CTGTCGTGGC GGATCATGGG GCTGCTCTCC
GGTTTCCTGG ACCAGCCGGC TTTTGCACCC CTGGCGGGAT ACCTGGCAGG GGAGGAGCGG
GAGCTGAAGC TCTACCAGCT TGCCGGGAAG ATCGCCGACA CCTTCGATCA GTACACGATC
TTCCGTCCCG ACATGATCGC CCGCTGGGAA CAGGGAACCG AGGACCACTG GCAGGCCGTC
CTCTGGCGCG CCCTGGCGGG GGAGGGGAGA GGGCTCCACC GGGAGGCGGT GCGTAGCGAA
TTCTTCCGGC GCCTGGCCCG GGGAGAGGTG GACACGGCGC TTTTCCCGGA GCGGATCACC
GTCTTCGGCA TCTCGTACTT ACCCCAGTTC CACCTGGATG TCTTCCGGCG CATCGCCGAT
TTCACCGAGG TGAACCTCTT TGTCATGGGC CCCTGCCGGG AGTACTGGGC CGACATCCTC
CCCGAGCGGA TCATCGCCCG GCTCTCTCCG GAGGAGCGGG AGGTGCGGAT CGAGGGGAAC
CCCCTCCTGG CCTCCCTGGG GCTCCTGGGG AAGGAGTTTT CCGATACCCT CGTGGAGCTG
GGCGCCACGG CCGGCGGCGA CACCGACCTC TACGGCGATG CCCCCGACAC GACCCTCCTC
GGCATGGTGC AGAACGACAT CCTCCGCCTG GAGGGGAGCA GCGGCGACCA GCGCCCCGTG
GACGCGGCGG ACCGCTCCAT CCTGATTTCA TCCTGCCACA GCCCCATGCG TGAGGTGGAG
GTGCTCCACG ACACCCTCCT GAACCTCTTT GCCTCCGCGG ACGATCTCAC CCCCCGCGAT
ATCCTCGTCA TGACGCCGGA CATCGAGACC TACGCCCCCT ATATCTCCGC CGTGTTCGAC
GGGTGCCGGG ACCCGCGGCT GAAGATTCCC TACTCCATCG CCGACCGGAG CATCCGGAGG
GAAGGGGGGC TTGCGGAGAC GTTCCTGGCA ATCCTCGACC TTTCCGGCAA GCGGTTCCCG
GTGACCGCGG TCACGGAGAT CCTGGCCTCC TCCCCGGTTC ACGGCCGGTT CGGCCTCGAT
GCCGGCCATC TGGAACTGAT CCGCACCTGG CTGGAGGAGA CCCGCATCCG GTGGGGAATG
GACGGTGAGG AGCGGCGCCG TGCCGGGTTT CCCCCCTACC GGGAACACAG CTGGCGGGCC
GGGCTGGACC GGCTCATCCT GGGATATGCC ATGCCAGAGG AGGATGGCCG GATGGTGGAG
GGGATTCTCC CCTTCGACGC CATGGAAGGG GAGGGACCGG CGGTCCTGGG ACGGTTTGCG
GGCTTCGTGG AAGGGCTCCA CGCCTTGGTG GACGAACTGG ACCGCCCCCG CACCCTGACG
GAGTGGGTGC GGCTCTGCCG GCGGATTCTC GACGACTTTT TCGCCCCTGG GGAGGAGGGG
GCTTTTGACC TGGCCACCCT GAACGGCATT CTCACCGAGT TGGAGACGGT GCGGGACGAG
GCGGGATTCG GCGGCGCGGT GGCGCTGCCG GTGATCCGCG CCTGGCTCCG GGGACGGCTC
GACCGGGAGG TGCGGGGGCT CGGCTTCATG ACCGGCGGGG TCACCTTCTG CGCCATGCTT
CCCATGCGGA GCATCCCCTT CAAGGTCATC GCGCTCCTTG GCATGAGCGA CGGTGCTTTC
CCCCGCCGGA ACACCCCCCC CGGCTTCGAC CTCATAGCCC GGGACCGGCG GCGGGGAGAC
CGCTCCCTGC GGGACGAGGA CCGTTACCTC TTCCTGGAGG CCCTTCTGTC GGCCCGGCGG
CATTTTATCA TCAGCTACAC GGGGCAGAGC ATCCGGGACA ACAGCACGCT TCCTCCATCG
GTCCTCGTGG ACGAGTTTCT CGACTACCTG GGGCGCCGCT TCTCGGACGG CACTCCGGAC
TTCCCGAAAA AACTCGTGAG CAAGCACCGG CTTCAACCCT TCAGCCCGAC CTACTTCACC
GGCGACGGCA CGCTTTTCAG CTACTCGGAG GAGAACTGCC GGGCCGTGGC CCAACGCCTG
AAGGGTGCCG TGGCGGTACC TACCTTCATC ACCGAGCCCC TGCCGGAGCC TCCGGATGAA
CTGCTGACGG TCTCCCTTTC AGCTCTCCTT TACTTCTTCG ATAACCCGGC CCGCTACTTC
GTGCGGACCC GGCTCGGCAT CCGGCTCGAC GAGCTTCCGC CTCCCCTGGA AGACCGGGAG
CCCTTTGCCA TTGATTCCCT CGACGCCTAC CGGCTCAGGG AAGAGATGCT GGACCTGGCC
CTGGCGGGAC GGGAACCGCG GGAAACCTTT GCCGTGGCCC GGGCCCGGGG GATACTGCCG
CCGGCCCGCC AGGGGGAGCT CCTGTTCCGG GGGCTTGGCG ACGGAGTTGA GGATCTGGCT
GCACAGATCA GGGCGCTGAC CGGTGGAAGG TCGCCGCTGG ATCCTCTCCC CGTTGACCTT
GCCCTGGGGC CTTACCGGAT CACCGGGATG TTGGGGGATA TCTGGCCCGT GGCGCTTCTG
CGCCATAAGG GGGCGAAATG TTCGGGGCGC GATCAGGTAC GGCTCTGGAT CGAGCATCTG
CTGCTGAATC TTCTCGCCCA GGAGGGGTAT CCGGCCGCAA GCATCCTTGT TGCAACCGAT
GTTTCCCTGC GGTTTGAGCC GGTGCCGAAT CCCATGGTGC ACCTGGAGAC CCTTCTCGGC
CTCTACGGGC AGGGGCTCCG GGAGCCGCTC CGGTTCTTCC CCCGCACGGC GGCGGCCTAT
GCGGTAAAGG GAGAGCTTTC CGCTGCCCGC AACGCTTGGG GAGGGGAGTT CTTCCCCGAG
GGGGACGACC CCTACTACCG CCTCTGCTTC GGCGGCATCG ACCCCCTCGA CGGGGAATTC
GAGCGGATCG CCCGGGCGGT ATTCGGCCCC CTGAACGAGC ATCGGCAGGG CAAGGGGGAG
TAA
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| Protein sequence | MPLFLYSSNR MEHLVDRLVE VLRRPLAAPL APEVIVVQSK GMQRWLSMEL ATATGVWANG
AYPFPNAFVW DLFRKALPDL PAASPFDPAV LSWRIMGLLS GFLDQPAFAP LAGYLAGEER
ELKLYQLAGK IADTFDQYTI FRPDMIARWE QGTEDHWQAV LWRALAGEGR GLHREAVRSE
FFRRLARGEV DTALFPERIT VFGISYLPQF HLDVFRRIAD FTEVNLFVMG PCREYWADIL
PERIIARLSP EEREVRIEGN PLLASLGLLG KEFSDTLVEL GATAGGDTDL YGDAPDTTLL
GMVQNDILRL EGSSGDQRPV DAADRSILIS SCHSPMREVE VLHDTLLNLF ASADDLTPRD
ILVMTPDIET YAPYISAVFD GCRDPRLKIP YSIADRSIRR EGGLAETFLA ILDLSGKRFP
VTAVTEILAS SPVHGRFGLD AGHLELIRTW LEETRIRWGM DGEERRRAGF PPYREHSWRA
GLDRLILGYA MPEEDGRMVE GILPFDAMEG EGPAVLGRFA GFVEGLHALV DELDRPRTLT
EWVRLCRRIL DDFFAPGEEG AFDLATLNGI LTELETVRDE AGFGGAVALP VIRAWLRGRL
DREVRGLGFM TGGVTFCAML PMRSIPFKVI ALLGMSDGAF PRRNTPPGFD LIARDRRRGD
RSLRDEDRYL FLEALLSARR HFIISYTGQS IRDNSTLPPS VLVDEFLDYL GRRFSDGTPD
FPKKLVSKHR LQPFSPTYFT GDGTLFSYSE ENCRAVAQRL KGAVAVPTFI TEPLPEPPDE
LLTVSLSALL YFFDNPARYF VRTRLGIRLD ELPPPLEDRE PFAIDSLDAY RLREEMLDLA
LAGREPRETF AVARARGILP PARQGELLFR GLGDGVEDLA AQIRALTGGR SPLDPLPVDL
ALGPYRITGM LGDIWPVALL RHKGAKCSGR DQVRLWIEHL LLNLLAQEGY PAASILVATD
VSLRFEPVPN PMVHLETLLG LYGQGLREPL RFFPRTAAAY AVKGELSAAR NAWGGEFFPE
GDDPYYRLCF GGIDPLDGEF ERIARAVFGP LNEHRQGKGE
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