Gene Gmet_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1890 
Symbol 
ID3739166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2104068 
End bp2105894 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content58% 
IMG OID637779181 
ProductFtsH peptidase 
Protein accessionYP_384844 
Protein GI78223097 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.86964e-12 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value9.19555e-11 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAACCAGT TCTACAAAAA CCTGGCGCTC TGGCTTGTGA TCAGCTTGAT GATGATTCTT 
CTCTTTAACC TGTTCAATAA ACCGCGCACC ACCTCTGAGC GGTTGAGCTA CAGCGACTTC
ATCACCGCCG TCGACGCGGG CAAGGTGAAT GCGGTAACCA TTCAGGGAAA TGAAATTATC
GGCAAGTTTG CCGACGGCAA GGAGTTCAGA AGCTACAAGC CCTTGGACGC CACGCTCTCG
GACAAGCTTC TCGAGAAGAA GATCAGCATT TCAGCCAAGC CGGAGGAAGA GAAGGTTTCC
TGGTTCTCCA TCTTCATCTC CTGGTTCCCG CTTCTTTTTC TGGTGGGTGT CTGGATATTC
TTCATGCGTC AGATGCAGGG GGGTGGCGGC AAGGCCATGG CCTTCGGCAA GAGCCGGGCT
AAGCTCCTTA CCGAGGCCCA AGGACGGATC ACCTTCGAGG ACGTGGCAGG CGTCGACGAG
GCCAAGGAAG AACTGGAGGA GATTATCCAG TTCCTGAAGG ATCCGAAGAA GTTTACCAAG
CTCGGCGGTC GTATCCCCAA AGGTGTGCTC CTGGTTGGCC CTCCGGGAAC CGGCAAAACC
CTCCTGGCCC GTGCCGTGGC CGGCGAGGCG GGCGTTCCCT TCTTCTCCAT CTCCGGTTCC
GACTTTGTCG AGATGTTCGT GGGGGTCGGT GCATCCCGAG TCCGTGACCT CTTCGTCCAG
GGGAAGAAGA ATGCCCCATG CATCATCTTC ATCGACGAGA TCGACGCTGT CGGCCGCCAC
CGCGGGGCAG GACTCGGCGG CGGACATGAT GAGCGCGAAC AGACCCTTAA CCAGCTTCTG
GTTGAAATGG ACGGTTTCGA GTCCAACGAG GGTGTCATTC TGATCGCCGC AACCAACCGT
CCCGACGTTC TCGACCCGGC TCTCCTTCGT CCCGGCCGCT TCGACCGCCA GGTCGTTGTT
CCCCAGCCCG ACGTGAAGGG GCGGGAGATG ATCCTCAAGG TTCATACCAA AAAGACCCCC
CTGGGGCCCA ACGTCAATCT CGATGTCATT GCCCGCGGAA CCCCCGGTTT TTCGGGCGCC
GATCTGGCCA ACGTGGTGAA CGAGGCAGCG CTTCTTGCTG CGCGCAAGGA CAAGAGTGTT
GTGGATATGC AGGATTTCGA CGATGCCAAG GACAAGGTCC TCATGGGGGT CGAGCGCCGG
AGCATGGTCA TCTCCGAGGA CGAAAAGAAG AACACCGCCT ACCACGAGGC GGGCCATACC
CTGGTGGCAA AGCTCATCCC CGGTTCCGAT CCTGTTCACA AGGTTTCCAT CATCCCCCGC
GGCCGGGCCT TGGGAATCAC CATGCAGCTC CCCAGCGAGG ACAAGCACAG CTACTCGAAG
GAAGCACTCC TCAATCGCAT CGCCGTTCTC ATGGGGGGGC GTGCCGCAGA GGACATCATC
TTTGGAAGCC TCACCACCGG TGCGGGCAAC GATATCGAGC GGGCCACGGA TCTTGCCCGC
AAGATGGTCT GCGAATGGGG CATGAGCGAC AAGATGGGCC CCGTGTCCTT CGGCAAGAAG
GAGGAGTCGA TCTTCCTGGG CCGCGACATG TCCATGCACA AGAACTACAG CGAGGCCACA
GCCGTGGAGA TCGACGGCGA GATCCGCAAG ATCGTCGAAG ATAGTTACAG CCGCGTAACC
ACGCTTCTCA GGGACAACAT CGATATTCTC CACAAGCTTT CCCTGGAGCT TATTGAGAAG
GAAAACCTGA CTGGCGACGA AGTGGAGCAG ATCGTCAGGT CCGTCAGGGG AACGGTTCCG
GCTTCCGAGG AAATTCCTGC CTCCTGA
 
Protein sequence
MNQFYKNLAL WLVISLMMIL LFNLFNKPRT TSERLSYSDF ITAVDAGKVN AVTIQGNEII 
GKFADGKEFR SYKPLDATLS DKLLEKKISI SAKPEEEKVS WFSIFISWFP LLFLVGVWIF
FMRQMQGGGG KAMAFGKSRA KLLTEAQGRI TFEDVAGVDE AKEELEEIIQ FLKDPKKFTK
LGGRIPKGVL LVGPPGTGKT LLARAVAGEA GVPFFSISGS DFVEMFVGVG ASRVRDLFVQ
GKKNAPCIIF IDEIDAVGRH RGAGLGGGHD EREQTLNQLL VEMDGFESNE GVILIAATNR
PDVLDPALLR PGRFDRQVVV PQPDVKGREM ILKVHTKKTP LGPNVNLDVI ARGTPGFSGA
DLANVVNEAA LLAARKDKSV VDMQDFDDAK DKVLMGVERR SMVISEDEKK NTAYHEAGHT
LVAKLIPGSD PVHKVSIIPR GRALGITMQL PSEDKHSYSK EALLNRIAVL MGGRAAEDII
FGSLTTGAGN DIERATDLAR KMVCEWGMSD KMGPVSFGKK EESIFLGRDM SMHKNYSEAT
AVEIDGEIRK IVEDSYSRVT TLLRDNIDIL HKLSLELIEK ENLTGDEVEQ IVRSVRGTVP
ASEEIPAS