| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1872 |
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| Symbol | clpX |
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| ID | 3740270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2086865 |
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| End bp | 2088118 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637779159 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_384826 |
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| Protein GI | 78223079 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00778221 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.0155026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTAGAA GAAACGACAG CAGCGAAAAT CTGACCTGTT CTTTCTGTGG CAAGAGCCAG
GATGAGGTGA AGAAGCTCAT CGCAGGGCCG ACGGTCTATA TTTGTGATGA ATGCATCGAA
CTCTGCAATG ATATTATTGC CGAAGAAAGC AAGCTTGAAG AGGCCATGGG ACCGGACGTA
AAGAAACTTC CCAAGCCCCG TGAAATCAAG GATGTTCTTG ATGAGTACGT CATCGGTCAG
GACCGGGCCA AGAAAATCCT TGCCGTTGCT GTCTACAATC ACTACAAGCG TATCGAGTCC
ATGGGTAAGC CAAGCGACGT GGAGATGCAG AAAAGCAACA TACTCCTCTT GGGTCCCACC
GGTTCAGGCA AGACTCTTCT TGCCCAGACC CTTGCGCGGA TTCTCAGGGT TCCGTTCGCG
ATGGCTGACG CCACCAATCT TACGGAAGCC GGGTATGTTG GTGAGGATGT TGAGAATATT
ATCCTCAACC TCCTGCAGGC TGCCGATTAC GATGTGGAGC GTGCCCAGAA GGGCATTATC
TATATTGACG AAATAGACAA GATTGCCCGC AAATCCGATT CTCCGTCCAT AACCCGCGAT
GTCTCGGGGG AAGGGGTTCA GCAGGCGTTG CTCAAAATAA TTGAAGGCAC CGTTGCCAGC
GTGCCTCCAA AGGGTGGCCG AAAGCATCCC CAGCAGGAAT TTCTCAAGGT TGATACCTCA
AACATTCTGT TCATCTGCGG TGGAGCCTTT GCCGGCCTCG ATAACATCAT TCAGCAGCGT
ATTGGTGTCA AGACCCTTGG CTTTGGTGCC GACGTCAAGA GCAAGGTGGA GAAGAAGGCC
GGTGAACTCC TTACTGACGT TACCCCGGAG GATCTTCTCA AGTTCGGGTT TATCCCAGAG
TTTATTGGGC GTCTTCCGGT GCTTGCCACG CTTCACGAAC TGGACGAGGC AGCAATGGTT
CAGATTCTCA AAGAACCGAA GAGTGCTCTC GTCAAGCAGT ACCAGAAACT CTTCGAGATG
GAACACGTGA AGCTCAAATT TACCGATGGT TCACTCGTCG CTATAGCGCG TGAAGCTCTG
AAGCGCAAGA CTGGTGCCCG GGGGCTTCGA TCCATTCTGG AAAATGCCAT GCTCGATATC
ATGTACGAGA TTCCTTCTCA AACCATGGTA AAGGAAGTAG TCATAAGCGA AGATGTAATC
TATAACCGGG AAAAACCGAT CATAGTCTAC GAAAGTGTGG CGGAATCCGC CTGA
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| Protein sequence | MSRRNDSSEN LTCSFCGKSQ DEVKKLIAGP TVYICDECIE LCNDIIAEES KLEEAMGPDV
KKLPKPREIK DVLDEYVIGQ DRAKKILAVA VYNHYKRIES MGKPSDVEMQ KSNILLLGPT
GSGKTLLAQT LARILRVPFA MADATNLTEA GYVGEDVENI ILNLLQAADY DVERAQKGII
YIDEIDKIAR KSDSPSITRD VSGEGVQQAL LKIIEGTVAS VPPKGGRKHP QQEFLKVDTS
NILFICGGAF AGLDNIIQQR IGVKTLGFGA DVKSKVEKKA GELLTDVTPE DLLKFGFIPE
FIGRLPVLAT LHELDEAAMV QILKEPKSAL VKQYQKLFEM EHVKLKFTDG SLVAIAREAL
KRKTGARGLR SILENAMLDI MYEIPSQTMV KEVVISEDVI YNREKPIIVY ESVAESA
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