Gene Gmet_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1870 
Symbol 
ID3741547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2083063 
End bp2083803 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content52% 
IMG OID637779154 
Productglycosyl transferase family protein 
Protein accessionYP_384824 
Protein GI78223077 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.00880451 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0336485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTAT ATGTCGTCGT ACCAACCTAT AACGAGAGTG ACAATATCGT TGCACTTATG 
GAGAAGATAC TGGCTCAGCG TGACAACATA CATGTCCTGG TGGTGGATGA TAATTCTCCG
GACGGCACGG GAGAAATCGC TGCCCGGATG AGTAGTGACA ATCCACGTAT CCACGTGCTC
CGCCGTTCTG GTAAAATGGG GCTTGGCTCA GCCTATTGTG ACGGATTCAG AGTGGCTTTG
AGGGATGGGG CCGATTTCAT CATCGAAATG GATGCCGACT TTTCCCACGA CCCGGCAACT
ATTCCAGCGC TCCTTGCCGC TACGGACAAG TATGACGTTG TGGTTGGATC TCGCTATCTG
AACGGCGTAA GTGTTGTCAA TTGGCCCATC AGACGACTGA TGCTCAGCTA CTTCGCAAGT
GTCTACACAC GATTCGTAAC CGGGCTTGCG CTTCGAGACT GCACCAGCGG CTTCAAGTGC
TTCCGACGTC GAGTTATTGA ATCCGTCGAC TTGGATACGA TACGGTCCGA CGGATACTCA
TTCCAGATTG AGATGAACTA CCGTTGCGTC GAGCGAGGTT TCCGTGTCGG CGAGATTCCG
ATTATCTTCA TTGACCGTCA TGCGGGAAGT TCCAAAATGT CGAAGAAGAT TGTCCGGGAA
GCCGTCTTGA TGGTCTGGAA GTTAAAGCTA GGTTCATTGG TCAAAAAGCT GACTCGCAGG
GGGGACCGCC ATGCTGCATG A
 
Protein sequence
MKVYVVVPTY NESDNIVALM EKILAQRDNI HVLVVDDNSP DGTGEIAARM SSDNPRIHVL 
RRSGKMGLGS AYCDGFRVAL RDGADFIIEM DADFSHDPAT IPALLAATDK YDVVVGSRYL
NGVSVVNWPI RRLMLSYFAS VYTRFVTGLA LRDCTSGFKC FRRRVIESVD LDTIRSDGYS
FQIEMNYRCV ERGFRVGEIP IIFIDRHAGS SKMSKKIVRE AVLMVWKLKL GSLVKKLTRR
GDRHAA