Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1852 |
Symbol | |
ID | 3741529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2065231 |
End bp | 2065869 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637779136 |
Product | SARP family transcriptional regulator |
Protein accession | YP_384806 |
Protein GI | 78223059 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1.31253e-17 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.969216 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCAC AGCCTTCAGG TGCAACGGTT GATAAAGGAT CGGTCAACCC TGAGCAGATT TCCATAAAAA CCTTCGGTGG ACTGGGACTT TCTTATCTCA ATTCCCCAAT GACCATTTTA TGGGAAAGCC AGAAGGCGAG GATACTCTTC TGCTATTTGC TCATTTCCTA CGACCAGTGG CTCCACAGAG ACAAACTCAT TGACATGTTG TGGCCTGGCT GTGACCCGGT CTCCGGCGCA AAGAATTTCA AAACCACCTT GAGCAGACTC CGCAAGTCAT TTATGGGCCC GCGCAGTATT AATCCCATTA TGACTCTTGG TGAAGCCATC CGTCTCGATT TCAATATTTT CTCCCTTGAT TCGAGCCAAT TCAAAGGATA CGCTCAGACC GGAATCAAGA TGCTGGCTCG TGGAGACATC TCCGGGGCCA GGAGATATCT CGAAGCTGCT CAGGATGAAT ATTCTGGGGA GTTCCTTCCC GAAGAGCCCT TCGATCATCA TATCTGCGCT GAACGAGCGG AACTTGAAAG ACTTCACGAA TCAGTCCTTA CTTCTCTTCA AAAGGTTTAC CAACTCGAGG GCAACAACGA TGCCGTTGAA GCCATTTCCT TCCTCAAAGC CGTTCACACA AACAGCTGA
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Protein sequence | MNPQPSGATV DKGSVNPEQI SIKTFGGLGL SYLNSPMTIL WESQKARILF CYLLISYDQW LHRDKLIDML WPGCDPVSGA KNFKTTLSRL RKSFMGPRSI NPIMTLGEAI RLDFNIFSLD SSQFKGYAQT GIKMLARGDI SGARRYLEAA QDEYSGEFLP EEPFDHHICA ERAELERLHE SVLTSLQKVY QLEGNNDAVE AISFLKAVHT NS
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