| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1852 |
|---|
| Symbol | |
|---|
| ID | 3741529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2065231 |
|---|
| End bp | 2065869 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637779136 |
|---|
| Product | SARP family transcriptional regulator |
|---|
| Protein accession | YP_384806 |
|---|
| Protein GI | 78223059 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1.31253e-17 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 0.969216 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCAC AGCCTTCAGG TGCAACGGTT GATAAAGGAT CGGTCAACCC TGAGCAGATT
TCCATAAAAA CCTTCGGTGG ACTGGGACTT TCTTATCTCA ATTCCCCAAT GACCATTTTA
TGGGAAAGCC AGAAGGCGAG GATACTCTTC TGCTATTTGC TCATTTCCTA CGACCAGTGG
CTCCACAGAG ACAAACTCAT TGACATGTTG TGGCCTGGCT GTGACCCGGT CTCCGGCGCA
AAGAATTTCA AAACCACCTT GAGCAGACTC CGCAAGTCAT TTATGGGCCC GCGCAGTATT
AATCCCATTA TGACTCTTGG TGAAGCCATC CGTCTCGATT TCAATATTTT CTCCCTTGAT
TCGAGCCAAT TCAAAGGATA CGCTCAGACC GGAATCAAGA TGCTGGCTCG TGGAGACATC
TCCGGGGCCA GGAGATATCT CGAAGCTGCT CAGGATGAAT ATTCTGGGGA GTTCCTTCCC
GAAGAGCCCT TCGATCATCA TATCTGCGCT GAACGAGCGG AACTTGAAAG ACTTCACGAA
TCAGTCCTTA CTTCTCTTCA AAAGGTTTAC CAACTCGAGG GCAACAACGA TGCCGTTGAA
GCCATTTCCT TCCTCAAAGC CGTTCACACA AACAGCTGA
|
|---|
| Protein sequence | MNPQPSGATV DKGSVNPEQI SIKTFGGLGL SYLNSPMTIL WESQKARILF CYLLISYDQW
LHRDKLIDML WPGCDPVSGA KNFKTTLSRL RKSFMGPRSI NPIMTLGEAI RLDFNIFSLD
SSQFKGYAQT GIKMLARGDI SGARRYLEAA QDEYSGEFLP EEPFDHHICA ERAELERLHE
SVLTSLQKVY QLEGNNDAVE AISFLKAVHT NS
|
|---|
| |