Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1848 |
Symbol | xseA |
ID | 3741525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2059258 |
End bp | 2060619 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637779132 |
Product | exodeoxyribonuclease VII large subunit |
Protein accession | YP_384802 |
Protein GI | 78223055 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1570] Exonuclease VII, large subunit |
TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000692777 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAACTCT TTCCTGAAAA ACGGATTTTA ACCGTATCCC AACTCACCTC CCTCATCAGG GGAGTACTTG AAGAGAATTT CGAGCACGTT TGGGTGGAGG GTGAGGTTTC AAACCTTGCA ATGCCTGCTT CCGGGCACCT GTATTTTACG CTCAAGGATG CCGGCGCCCA GATTCGCTGC GTTATGTTCC GTGCGTCAGC TCGAGCCCTT AAATTCCGCC CCAGGGATGG TATGGGATTG ATCGTCAGGG GGCGGATTAC GGTTTACGAA CAGCGGGGTG ACTATCAGTT TCTCGTTGAA TATCTGGAGC CGCGGGGAGT CGGAGCACTC CAGCTTGCGT TCATTCAGCT AAAGGAAAAA TTGGCCAAGG AGGGGCTTTT CGCCGAGGAA CATAAGAGGC CGATCCCATC CCTGCCGCAG CGGATCGGAG TGGTGACCTC GGCAACCGGG GCAGCTATTC ACGATATTCT CAACGTCCTG AACCGACGCT TTGCCAACGT GGAAGTTCTC ATCAGACCCG TCAAAGTCCA GGGTGAAGGG GCGGCTGACG AGATTGCCGA AGCGATCATC GACTTCAACC GTTACGGTGC TGTTGATGTC ATGATCGTGG GGAGGGGAGG GGGATCGCTG GAGGATCTGT GGGCCTTTAA CGAGGAGAAG GTCGCTCGTG CGGTCCACCG CTCCAGAATA CCAATCATAT CTGCCGTGGG TCACGAAATC GATTTTACCA TTGCAGACTT TGTTGCTGAC CTTAGGGCAC CGACTCCATC GGCAGCGGCA GAACTGGTCG TCAAGAGCAA AGAGGAGTTG GCGTCGAAAG TCGAGTTCCT CCGTCACCGG CTCATACAGA CACTGCGGCG CATTCTGGCC GATGCTGGTG GTGAGTTGGA GAGCTTGAGC CGTGCCCTCC GCGACCCTAC CGTGCTTTTA GGACACCTCT CCCAGCGCTT GGATGACATC TTCGTACGAC TTGAACGCGC TATTGCGGGA GACCTTAAAG ACCGTGGGAG GATGCTAGAA GCACTCAAGA ATCATCTGAG GCTCAGAAAT CCGGCCCTTA AGGTGGAGCG TGCACGGGAA CGGGTTATTG CTTTGAGCGA CAAAAGTGAA ATAGCCCTGC TTCGTCACGT CGACCGCTAC CGTGAGGCTG CGGCCGTGCA TTCGGCACGG CTGGAAACGC TTTCTCCACT CGGCACCTTG GCGAGGGGGT ACAGCGTAGC CCTTAAACTG CCTGAACGGG TTCCTGTCAA GACGTTCAGG CAACTCGCCC TGAAAGATAG GCTTGAACTT CTTTTTCATC ACGGACGAGC CTGGTGCCGG GTGGAGTCCC TTGACGAGGA TGCGTCCTGC AGCCATGAAT GA
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Protein sequence | MELFPEKRIL TVSQLTSLIR GVLEENFEHV WVEGEVSNLA MPASGHLYFT LKDAGAQIRC VMFRASARAL KFRPRDGMGL IVRGRITVYE QRGDYQFLVE YLEPRGVGAL QLAFIQLKEK LAKEGLFAEE HKRPIPSLPQ RIGVVTSATG AAIHDILNVL NRRFANVEVL IRPVKVQGEG AADEIAEAII DFNRYGAVDV MIVGRGGGSL EDLWAFNEEK VARAVHRSRI PIISAVGHEI DFTIADFVAD LRAPTPSAAA ELVVKSKEEL ASKVEFLRHR LIQTLRRILA DAGGELESLS RALRDPTVLL GHLSQRLDDI FVRLERAIAG DLKDRGRMLE ALKNHLRLRN PALKVERARE RVIALSDKSE IALLRHVDRY REAAAVHSAR LETLSPLGTL ARGYSVALKL PERVPVKTFR QLALKDRLEL LFHHGRAWCR VESLDEDASC SHE
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