| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1707 |
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| Symbol | |
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| ID | 3741383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1916290 |
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| End bp | 1920231 |
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| Gene Length | 3942 bp |
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| Protein Length | 1313 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637778992 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_384663 |
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| Protein GI | 78222916 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGGC GCGAACTGAT GGCCGGCGTC CTCCTGGGGA GCGCCGGCTT TCTCGTCAAC
TGGTTCAAAC TGTCACTGTT CTTCAACGTG GACTTTCTGT TCGGCTCCGT GTTCAGCATG
TTCGCCCTGC TGCGGTTCGG ACCGGCCACC GGTCTGCTGG CAGCGGTGAT TGCCGCAGGG
TGCACCTGGC TGCAGTGGCA CCACCCCTGG GCCATCGTCA TTTTCGGCTG CGAGGCCCTC
TGTGCCGGTT GGCTGAGAAA CCGCAAACGC ATGGACCTGA TGCTCGGCGA CATCATCTAC
TGGTTCAGCG GCGGCCTCGT GCTGGTCTGG CTGTTCTATC ACCAGGTCAT GGGGTTCAAT
GCCGGCGCCA CTCTGTTGGT CGCCCTGAAG CAGGGGATGA ACGGCATCAT CAACACCCTG
ATTGCCGAGG CTCTCTTTCT GCTGAGTTGG CGGTTGCGGG GCGGCACCGA ACTTCCTTCA
CTGCGTAAAT GGCTGGGAGT CATCCTGGAG GGAGTGGTGT TGGTGCCGGC GTTCGTTTTC
GCCTTTCTCG ATACAAGCTG GTATTTCCGC CAGCAGATGA CGCGCCTGCA GGAGAGTACC
GCCCGTACCG CTGAAGTGGG CAACCTTACG ATTTCAAGCT GGCTGGACGA AGAGCAGCAC
AAGCTGGGCA TGCTTGTCAA ACTGGTCGGT GACCCTGATC ACAACCCGTC CCAGGAGATG
CAGCGGCTCC TTGAAAGATA CCATGCCGCC CATGGCAGCG ACACCTACCG GCTGGGGGTC
ATGGATCGCA ACCATGTCAC TCGCGCCTTC TCGCCCCGCG TTGACGAAAA GGGCGTTTCC
ACCATCGGGG TATGGCTGGG TGACCGCCCT TACATAGCAG AGCTGAATGA CCCGTCGCAC
CCGATAGTTT TCGATGCCTT CATGGGCAAG ATTGGCGTAC CCGGCCCCCG TCTCATTATG
CTGGCCCCTT GCATGGTGGG AGGGGAATAC AGGGGGGCTG TTTTCAGCGT GGTATCTCTC
GGTCATCCTG CTGCACTGCT GAAGGGGATT GTCGGCAAAC GGGATGTCAA CCTGACGCTG
CTGGACAGAC ATCGCCGGGT TGTTGCCTCT ACCGACAGCG GCAAGAAGTT TCTGGAGCAG
TTTGCGCTGC CTAAGGGGGG GCAGCTGCAT TCGGTCGGTA GTAATGTGAG CCAATGGGTT
CCCGATCCGC AACCGGGGGG CGGCCCCATG AAACGCTGGA ATCGTTCGTT CTACATGACC
GAGATTGCGC TGGAGCCGAA ATCAGGCTTC CGACTGGTGG TGCAATCCTC GCTGGCACCG
TCACTCAAGG AGATCAACAA CCGCGCATCT ATCCTGCTGG GGGTTCTGGC AATACTGACA
CTGGTGGTGG TTGGCCTGTC CCGGTATTTC AGCAGGCGAT TGCTGGCGCC CTTTGCCATG
CTGGGAAAGG TTACCAGTCA GCTTCCGGTC AGGATTGCAC AGGGGGAGCA GATATCCTGG
CGCCCCGCGG AGGTCAGGGA GGAGCAGGAG CTTCAGGATA ACTTCCGGCT GATGGAAAAT
GCCCTGCAGA ATAGCTTCTC CGAACTGACT GCAATCAATG AGGAACTTGA GCACCGGGTC
ACGGAACGGA CCGCCGAACT GCGGATTGCC AAGGAGGCGG CTGAAAACAG CGAATTACAG
CTCCGCAGCA TAACCAATTC TGCCCACGAT GCGATTCTGA TGATGGACCA CCAGGGTTCC
ATTTCCTACT GGAATCCCGC CGCCGAGCAG ATTCTGGGGT ACAGCGCGGC AGAGGCTCTC
GGCAAGAACC TCCACGACCT TCTGACCCCT GAGCGCTATC TGGCCGACCA CCTTACGGCA
TTCTCCGAGT TCCAACAGAC CGGCTCCGGC AATGCCGTGG GCAAAACCCT TGAGCTCTTC
GCCCGGCGCA AGGATGGTCA GGAAATCGAG GTTGCCCTGT CGCTGTCCGC GGTTTTCCTC
AATGGGGCAT GGAATGCCGT GGGGTTGCTC CGGGACATCA CCGAACAGAA ACGGATCAAT
GCATCCCTGC GGATGCTTTC CGCCGCCGTG GAGCACAGCC CGGTGTCCAT CATCATTACC
GACCGGGACG GACGCATAGA GTATGTCAAC CCCAAGTCCT GCCAGATGAC CGGCTACGCC
TTTGAAGAAC TGCGGGGCCA GAACCCGCGC ATCATGAAAG GTCCGACCCA CCCGCCAGAG
TTCTATAAAA ACCTGTGGGA GACCATACTT TCAGGACGGG AGTGGTACGG AGAATTCCAT
AATCGCCGCA AGGACGGCAG TCTTGTGTGG GTTATGGCAT CCATTTCGCC CATCTACGAC
GAAAAGGGGG AAATCACCCA TTTTGTGGGG GTTCGTGAGG AAATCGAAAA GCAGAAAAAA
CTCCAGGAAG AGCTTGCCAA TATCGCACAA CTGGAGAAAG TCGCGCGGGA CCGGGCCGAA
CAGGCGAACA GGGCAAAGAG CGAGTTTCTG GCCGGCATGA GCCATGAGAT CAGAACGCCC
CTCAATGCAA TCATCGGCAT GAGTGACCTT CTGGCGGAAA CCCGTCTTGA CGGCGAACAA
TCAGGGTATC TGTCGGTTGT CCATTCAGCG GGCGAAACCT TGCAGGGACT GATTAACGAC
ATCCTTGACC TGTCGAAGAT CGAAGCCGGC ATGCTGCAGC TGGATTCTGT ACCCTTCAGT
CTTCGGGACT GCATCCGGCA ACTGACGGAC ATCACGTCGG TGAAAGCGTC CTCAAAGGGG
GTAACGTATT CCTTCTCCGT GAAATCCGCT GTCCCGGACT GGCTCATGGG AGATTCGCTG
CGGTTGCGGC AGGTGCTGAT CAACCTGGTG GGGAATGCCG TGAAATTCAC CGACAGCGGC
GGGAGTGTAC TTCTGGAGGT TGAGCCGGTC CAACAGTCCG ATGCCGAAGT ACTGATCAGG
TTTTCCGTGG CCGACACCGG CATCGGCATA GCGCCGGAAA AGCTGGACAC CATCTTCGAG
AGTTTCAGCC AGGCGGATTC ATCAACCACC CGGCGCTACG GCGGGACAGG GCTGGGGCTA
GCCATCTCCC GTCACCTTGC GGGGATGATG GGAGGTGAAA TCGGTGTGGA GAGCACCGTT
GGGAAGGGGA GCTGCTTCCG CTTCACAGTA CCTTTCGCCA TCTCGCGCAG AACAGAAGAG
CCGCTTCCGA AAGAACAACT TCCCGGAGAC AAGCTCGGCA GACCGCTCTC CATTCTGGTG
GTGGACGACA ATCTGGCGAA CCGCACCGTG CTGACGGCCT ATTTCCGGCG TACCGAGCAT
ACGGTAGAGT GTGCGGTAAA TGGCGAAGAA GCCCTTGCAA AGATCAAGGG GGGTGGATAT
GACGTGGTTT TCATGGATAT GGAGATGCCG GTCATGGATG GCTATACGGC AGTGCGCCTG
GTGCGTGAAT GGGAGCGGGA GACGGGCCGG GCGCCGCTGC CGGTGATCGC GCTCACTGCC
AATGCGCTCA AGGAAGATCA GTTAAGGAGC CTTGATGCCG GCTGTACCGC GCACCTGACC
AAACCGATCA AAAAGGACAA GCTGCTGGAA ATCGTCGGAG AATACCAGCA ACGACCACGG
ACCAACGGGA AGCAGGGAAC GAACATGGAT CGCGACAATG TGCCGGATAA AATAGTGGTC
GTCTGCGATC CGGACCTTGA AGACATCATC CCGGCCTATC TGGAGGGGAG AAAGACAGAA
GGCTCTGTCA TCCGTGAACT TGCGGTCAAT GGTCAGTTCG ACGAAGTGCG GACCATCGCC
CACGGCTTGA AGGGTTCCGG CGGCTGTTAC GGTTTTTCGA GGATAACGGA AATCGGGCGG
GATATGGAAC TGGCGGCGAA TGACGGCAAT CTCGTCGAGG TGTTGAAACA GCTCGATACC
CTCGAGGCGT ACCTGCAGGC AATTGAAGTC CGCTACGAAT AA
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| Protein sequence | MNRRELMAGV LLGSAGFLVN WFKLSLFFNV DFLFGSVFSM FALLRFGPAT GLLAAVIAAG
CTWLQWHHPW AIVIFGCEAL CAGWLRNRKR MDLMLGDIIY WFSGGLVLVW LFYHQVMGFN
AGATLLVALK QGMNGIINTL IAEALFLLSW RLRGGTELPS LRKWLGVILE GVVLVPAFVF
AFLDTSWYFR QQMTRLQEST ARTAEVGNLT ISSWLDEEQH KLGMLVKLVG DPDHNPSQEM
QRLLERYHAA HGSDTYRLGV MDRNHVTRAF SPRVDEKGVS TIGVWLGDRP YIAELNDPSH
PIVFDAFMGK IGVPGPRLIM LAPCMVGGEY RGAVFSVVSL GHPAALLKGI VGKRDVNLTL
LDRHRRVVAS TDSGKKFLEQ FALPKGGQLH SVGSNVSQWV PDPQPGGGPM KRWNRSFYMT
EIALEPKSGF RLVVQSSLAP SLKEINNRAS ILLGVLAILT LVVVGLSRYF SRRLLAPFAM
LGKVTSQLPV RIAQGEQISW RPAEVREEQE LQDNFRLMEN ALQNSFSELT AINEELEHRV
TERTAELRIA KEAAENSELQ LRSITNSAHD AILMMDHQGS ISYWNPAAEQ ILGYSAAEAL
GKNLHDLLTP ERYLADHLTA FSEFQQTGSG NAVGKTLELF ARRKDGQEIE VALSLSAVFL
NGAWNAVGLL RDITEQKRIN ASLRMLSAAV EHSPVSIIIT DRDGRIEYVN PKSCQMTGYA
FEELRGQNPR IMKGPTHPPE FYKNLWETIL SGREWYGEFH NRRKDGSLVW VMASISPIYD
EKGEITHFVG VREEIEKQKK LQEELANIAQ LEKVARDRAE QANRAKSEFL AGMSHEIRTP
LNAIIGMSDL LAETRLDGEQ SGYLSVVHSA GETLQGLIND ILDLSKIEAG MLQLDSVPFS
LRDCIRQLTD ITSVKASSKG VTYSFSVKSA VPDWLMGDSL RLRQVLINLV GNAVKFTDSG
GSVLLEVEPV QQSDAEVLIR FSVADTGIGI APEKLDTIFE SFSQADSSTT RRYGGTGLGL
AISRHLAGMM GGEIGVESTV GKGSCFRFTV PFAISRRTEE PLPKEQLPGD KLGRPLSILV
VDDNLANRTV LTAYFRRTEH TVECAVNGEE ALAKIKGGGY DVVFMDMEMP VMDGYTAVRL
VREWERETGR APLPVIALTA NALKEDQLRS LDAGCTAHLT KPIKKDKLLE IVGEYQQRPR
TNGKQGTNMD RDNVPDKIVV VCDPDLEDII PAYLEGRKTE GSVIRELAVN GQFDEVRTIA
HGLKGSGGCY GFSRITEIGR DMELAANDGN LVEVLKQLDT LEAYLQAIEV RYE
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